Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4nz3A_

Fold library idPDB HeaderMoleculeTitle
c4nz3A_PDB header: hydrolaseChain: A: PDB Molecule: deacetylase da1;PDBTitle: structure of vibrio cholerae chitin de-n-acetylase


Added to library: Sat Aug 16 08:17:38 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PKGTIYLTFSDGPVNASVEVIKVLNQGGVKATFYFNAWHLDGIGDENEDRALEALKLALDSGHIVGNHSY
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)

S

STT



GGGTTT
SSSS
TTTT


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence DHMIHNCVEEFGPTSGADCNATGNHQIHSYQDPVRDAASFEQNLITLEKYLPTIRSYPNYKGYELARLPY
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP) STTGGGTSSS
STTT
TTBS




TTGGG
TTB
TTT

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TNGWRVTKHFQADGLCATSDNLKPWEPGYVCDPANPSNSVKASIQVQNILANQGYQTHGWDVDWAPENWG
Predicted secondary structure


















































SS confidence





































































Known secondary structure (DSSP)


TT

TTSSBSSS
TTSTT



TTS

TT



S
S
SSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence IPMPANSLTEAVPFLAYVDKALNSCSPTTIEPINSKTQEFPCGTPLHADKVIVLTHDFLFEDGKRGMGAT
Predicted secondary structure














































SS confidence





































































Known secondary structure (DSSP) SSSGGGG


TTTT
SSGGG

TT

TT
GGGTTGGGGSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence QNLPKLAEFIRIAKEAGYVFDTMDNYTPRWSVGKTYQAGEYVLYQGVVYKAVISHTAQQDWAPSSTSSLW
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) TT
TTSSS
B

TT

TT
TTSS


TT



SS
SS
 .........360.........370.........380.........390.........400...
Sequence TNADPATNWTLNVSYEQGDIVNYKGKRYLVSVPHVSQQDWTPDTQNTLFTALE
Predicted secondary structure






































SS confidence




















































Known secondary structure (DSSP)

S

B

TTB
TT
TT
S


TT

TTT
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D