Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4nz0F_

Fold library idPDB HeaderMoleculeTitle
c4nz0F_PDB header: transferaseChain: F: PDB Molecule: genome polyprotein;PDBTitle: the emcv 3dpol structure at 2.8a resolution


Added to library: Sat Mar 22 08:18:38 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GALERLPDGPRIHVPRKTALRPTVARQVFQPAFAPAVLSKFDPRTDADVDEVAFSKHTSNQETLPPVFRM
Predicted secondary structure

























































SS confidence





































































Known secondary structure (DSSP)




S
B



S



TT

S



TT
TT
SS
S










T
 .........80.........90.........100.........110.........120.........130.........140
Sequence VAREYANRVFALLGRDNGRLSVKQALDGLEGMDPMDKNTSPGLPYTTLGMRRTDVVDWETATLIPFAAER
Predicted secondary structure













































SS confidence





































































Known secondary structure (DSSP)
S







SSS



SSS


TTTTTTT

TTTT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LEKMNNKDFSDIVYQTFLKDELRPIEKVQAAKTRIVDVPPFEHCILGRQLLGKFASKFQTQPGLELGSAI
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) TT

SS



ST




T

BTTTTB
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence GCDPDVHWTAFGVAMQGFERVYDVDYSNFDSTHSVAMFRLLAEEFFSEENGFDPLVKDYLESLAISKHAY
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) T

STTSSS

TTS
TTTT

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence EEKRYLITGGLPSGCAATSMLNTIMNNIIIRAGLYLTYKNFEFDDVKVLSYGDDLLVATNYQLNFDRVRT
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) BTSS



SSS
TT

GGGSTTSS


 .........360.........370.........380.........390.........400.........410.........420
Sequence SLAKTGYKITPANKTSTFPLESTLEDVVFLKRKFKKEGPLYRPVMNREALEAMLSYYRPGTLSEKLTSIT
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) T

TTS
SS

SS

TTT
TTTT

TT
 .........430.........440.........450.........460
Sequence MLAVHSGKQEYDRLFAPFREVGVIVPTFESVEYRWRSLFW
Predicted secondary structure









SS confidence







































Known secondary structure (DSSP) GGG
STT




TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D