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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4nwwC_

Fold library idPDB HeaderMoleculeTitle
c4nwwC_PDB header: virusChain: C: PDB Molecule: capsid protein;PDBTitle: crystal structure of an n-terminally truncated capsid protein mutant2 of orsay virus


Added to library: Sat Aug 23 08:14:25 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SNSILLKGCDRIVTVVDASTYDAGSAIVSIPITPDIAYRLGSTARTFQRIKYRSLKFRVNAQCATTTAGG
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Known secondary structure (DSSP)

GGGS
TT


GGGSTT
S


SS


 .........80.........90.........100.........110.........120.........130.........140
Sequence YVAGFVKDAADVLPTGTASIPYLMSNTGSFTQPWWKSTVHNVKIPQKLFYTEAPTRGADAVREYCPGQFH
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Known secondary structure (DSSP) S
SS



SSTTSTT
TT




S

SS

SSS





 .........150.........160.........170.........180.........190.........200.........210
Sequence VLVDSKPSQICPVTVDLEWVVELHDATFRKESDQTAISAIVADHTLNVYGLPATSNRVGHILISPIGQTP
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Known secondary structure (DSSP) SS

SS

S










B

S

S


STT
SSSSB
SSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence KDLTPTRFATFFGFLPDDKFCVRIPTPVDVVLTGDNVYQSVEATHIRAYLVNGGLGIDFHLAAYNDTTHT
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Known secondary structure (DSSP) B


SSS


TT
TTTTTTTTTT
 .........290.........300.........310.........320.........330.........340.....
Sequence IQPIIPTLWNVYDVTGAVTAPFTSAIYDNHVWTHKDKFVPVSFQDEPIPGTVFDYLYPRSYSLPS
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SS confidence
































































Known secondary structure (DSSP)

GGG

B

TTS

B




TT

BTTT

S




S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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