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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4npsA_

Fold library idPDB HeaderMoleculeTitle
c4npsA_PDB header: cell adhesionChain: A: PDB Molecule: bartonella effector protein (bep) substrate of virb t4ss;PDBTitle: crystal structure of bep1 protein (virb-translocated bartonella2 effector protein) from bartonella clarridgeiae


Added to library: Sat Oct 11 08:29:52 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QALPSHYNYPNSLTLKNKYGITNHKDFTNKCAHDSAKAAINLRQEEPPKKFDSSYLKYLHKQLFKETFEW
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Known secondary structure (DSSP)

BGGGGB
TT
SSB

TT



S


SS
STTT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence AGHTRDLPFTFADGTVGVMIFATGNKVQDGLKNIDKMLIEKNNLQGLSHKEFIENIAEIFACLNYTHPFR
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Known secondary structure (DSSP) TT

TTS

TTS






TTTGGG
S



SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence EGNGRTQRIFCEKLAQAAGYYLDFSVVTKERMSEASITAAQDSNLEPMKKLFDDISNPIKTAVLKECINS
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Known secondary structure (DSSP) S
T



GGGS




 .........220.........230.........240.........250.........260.........270.........280
Sequence LKNIDHKNINDCIIVAADKGLTYKGIYTDNSPDSIILKTDNIYIICSKNDLAPEQLKTLKLGDECTITVP
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Known secondary structure (DSSP)
STTGGGS


TT

SSTTGGGS
T

TT


 .
Sequence M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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