PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4npbA_

Fold library id	PDB Header	Molecule	Title
c4npbA_	PDB header: isomerase	Chain: A: PDB Molecule: protein disulfide isomerase ii;	PDBTitle: the crystal structure of thiol:disulfide interchange protein dsbc from2 yersinia pestis co92

Links to external resources
Added to library: Sat Jan 11 08:55:21 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A D D S A I Q Q T L K K L D I Q Q A D I Q P S P I P G I S T V X T E S G V L Y I S A D G K H L L Q G P L Y D V S G D Q P I N V T N Q A L L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
S
S S T T
S S
T T S
S
S S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K L E A L S S E X I V Y K A P E E K H V I T V F T D I T C G Y C R K L H E Q X K D Y N A L G I T V R Y L A F P R Q G L S S Q A E K D X R S I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T G G G S
T T
T T
T T T T
T T
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence W C X A D R N K A F D D A X K N N D I S P A T C K T D I S K H Y Q L G V Q F G I Q G T P A I V L Q N G T I V P G Y Q G P K E X L Q X L N A H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S
T T
S
S T
S S S T T S
S

. . . . .

Sequence Q A S L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	D	D	S	A	I	Q	Q	T	L	K	K	L	D	I	Q	Q	A	D	I	Q	P	S	P	I	P	G	I	S	T	V	X	T	E	S	G	V	L	Y	I	S	A	D	G	K	H	L	L	Q	G	P	L	Y	D	V	S	G	D	Q	P	I	N	V	T	N	Q	A	L	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S										T	T			S							S	S	T	T							S	S							T	T	S						S						S	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	L	E	A	L	S	S	E	X	I	V	Y	K	A	P	E	E	K	H	V	I	T	V	F	T	D	I	T	C	G	Y	C	R	K	L	H	E	Q	X	K	D	Y	N	A	L	G	I	T	V	R	Y	L	A	F	P	R	Q	G	L	S	S	Q	A	E	K	D	X	R	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	G	G	G	S						T	T											T	T									T	T							T	T										T	T		T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	W	C	X	A	D	R	N	K	A	F	D	D	A	X	K	N	N	D	I	S	P	A	T	C	K	T	D	I	S	K	H	Y	Q	L	G	V	Q	F	G	I	Q	G	T	P	A	I	V	L	Q	N	G	T	I	V	P	G	Y	Q	G	P	K	E	X	L	Q	X	L	N	A	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	S	S											T	T									S			S											T			S	S	S					T	T	S					S
	.	.	.	.	.
Sequence	Q	A	S	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S