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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4noxA_

Fold library idPDB HeaderMoleculeTitle
c4noxA_PDB header: translationChain: A: PDB Molecule: eukaryotic translation initiation factor 3 subunit b;PDBTitle: crystal structure of a beta propeller


Added to library: Sat Sep 20 08:36:10 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RGRDQFVMYRGDTVGVFWNNEKDQPENIVDRQHWTETFVQWSPLGTYLTSVHAQGVQLWGGASWSRLRRF
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Known secondary structure (DSSP)



TT

TTS


SS
SS

TTS


SS
TTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence PHPFVNLVAFSPGEKYLVTWSNRPIQIPDSGHPVLTLDDDGKNYIIWDIETARPLRSFAQQDIFPWPVFK
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Known secondary structure (DSSP)

TT


TTSS
SS




TT

SS

GGGTT

TTTT






S
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence WSADDKYVARLNQGTSISIYELPKMNLLDKQAVKIEGVMDFEWAPATVQREGVKTYEQLFCFWTPEIGNN
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Known secondary structure (DSSP)
TTSSTTTTTTTGGGS

TT


SS



TT

S



BTTB
 .........220.........230.........240.........250.........260.........270.........280
Sequence PARVGLMSIPSKQIVRTLNLFSVSDVKMHWQSEGTYLCVKVDRHSKSKKSQATTLEIFRVKEKGVPVEVV
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Known secondary structure (DSSP)
TTT
S
TTSS
TT
STTSTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence DTIKDTVINFAWEPKGDRFVIITTPEPVGATAVPPKTSVSFFCPELKKGNQVGSFKHLRTLEKKNHNAIY
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Known secondary structure (DSSP) SS
TTSS



SS

SS


BB

SSS






B


 .........360.........370.........380.........390.........400.........410.........420
Sequence WSPKGRFVVIATVHNTQSSDLEFWDLDFDGEKPENEKDLAACLQLMGTGDHYGITDVEWDPSGRYVATWA
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Known secondary structure (DSSP)
SSSS

S
SS

SB
SS


GGGTTBS
B

TT


TTSS
 .........430.........440.........450.........460
Sequence SAWKHTMENGYHLYDFKGELLREEHIEKFKQWQWRPRPPT
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Known secondary structure (DSSP)
TTT

S

TT


TT






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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