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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4novA_

Fold library idPDB HeaderMoleculeTitle
c4novA_PDB header: hydrolaseChain: A: PDB Molecule: xylosidase/arabinofuranosidase xsa43e;PDBTitle: xsa43e, a gh43 family enzyme from butyrivibrio proteoclasticus


Added to library: Sat Oct 11 08:35:22 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EKTFHKNPIIKDIYTADPAPXVYGDTLYLYTTHDEDELVNDFYTXNDWRCFSTKDXVNWTDHGAIFSLDD
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Known secondary structure (DSSP)


SSS
SSSTT
SS
BTTB



SSSSSGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence IGWADARAWAPQAVERNGKFYLYCPVHKRNGGXAIAVGISDSPTGPFKDLGYPLVDEGDWNDIDPTVFID
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Known secondary structure (DSSP)
TT




TTTTS
SSTT



SS
SB

SSS


S

 .........150.........160.........170.........180.........190.........200.........210
Sequence DDGQAYLYFGNPELRYVLLNENXITYDKEVGIVKVPXTEEAFAKGSHDTGTSYGEGPWFYKRNDLYYXVY
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Known secondary structure (DSSP) TTS

SSS

TTSS
B
TTT






B
SSTTSBSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence AAFGVGKQNEHLAYSTSDSPTGPWKYGGVLXTEEGGVFTNHPGIADFKGHSYLFYHTGDLPGGSLFHRSV
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Known secondary structure (DSSP)

TT

S
SSTT



STT

S



TTS
STT
BTTB
 .........290.........300......
Sequence CVAEFTYNEDGTINPIPKCDGVEKIN
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Known secondary structure (DSSP)


TTS







S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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