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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4nhbB_

Fold library idPDB HeaderMoleculeTitle
c4nhbB_PDB header: transport proteinChain: B: PDB Molecule: trap dicarboxylate transporter-dctp subunit;PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 desulfovibrio desulfuricans (ddes_1525), target efi-510107, with3 bound sn-glycerol-3-phosphate


Added to library: Sat Nov 23 08:32:32 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TVIKMAGMKPEGEPETIGMHLFGKYLKELSNGKYEVQVFPNSQLGKEDAYIAATRKGIIQMCATGTQTSA
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Known secondary structure (DSSP)

SS
TTSTTTS

TTTT

TSSSSGGGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence LHPAMAMLETPMLFDNLDHARRAMEGKTFDLINEGFTEKSGLRTLNAFPLGFRHFYSKKPIKDVKDLEGM
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Known secondary structure (DSSP) T
GGGGGGG
TT

SSTSTTS


SS


STT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RMRVPNIPLYTNFAKECGISGQPMPFAEVPGALDQGVIDGGDSPLADIVSLKMYEITPEISLSGHILVIH
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Known secondary structure (DSSP)
SST


GGGTS
STTGGGT






 .........220.........230.........240.........250.........260.........270.........280
Sequence SLYINDKFFKSLPEQDQKWIEEAAKRSADDVWAMVADGDEKAKATILANKGNIHEPSKELHEHLVNAGKR
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Known secondary structure (DSSP) TS
TT



 .........290.........300.........310.
Sequence SWKLFYDTVPNAQAILDSADSYRESKAENLY
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Known secondary structure (DSSP) T
TTTTS








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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