Fold library entry viewer: c4nh0A_

Added to library: Sat Feb 14 08:57:06 2015
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	A	N	M	T	L	T	S	L	L	H	I	D	N	P	Y	N	L	D	P	A	V	L	W	R	P	R	P	Q	R	N	R	L	R	V	P	I	G	L	D	A	D	G	R	P	L	E	L	D	I	K	E	S	A	Q	G	G	M	G	P	H	G	L	C	I	G	A	T	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B					T	T		S		T	T	S							S					T	T	T	T	T								S	S	S								S		T	T	T	S	S	S		S								T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	K	S	E	L	L	R	T	L	V	L	A	L	A	M	T	H	S	P	E	V	L	N	F	V	L	V	D	F	K	G	G	A	T	F	L	G	M	E	G	L	R	H	V	S	A	I	I	T	N	L	E	E	E	L	P	L	V	D	R	M	Y	D	A	L	H	G	E	M	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	S		T	T	T								S	S	S			T	T	T	T	G	G	G		T	T									S	S	S	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	R	Q	E	H	L	R	H	S	G	N	Y	A	S	L	R	D	Y	E	K	A	R	M	E	G	A	P	L	P	P	M	P	T	L	F	I	V	L	D	E	F	S	E	L	L	S	A	K	P	D	F	A	E	L	F	V	M	I	G	R	L	G	R	S	L	G	V	H	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S		S	S																										T						T	T		G	G	G															T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	A	S	Q	R	L	E	E	G	K	L	R	G	L	D	T	H	L	S	Y	R	I	G	L	R	T	F	S	A	M	E	S	R	V	V	L	G	V	P	D	A	Y	E	L	P	P	S	P	G	N	G	Y	L	K	F	A	T	E	P	L	V	R	F	K	A	A	Y	V	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S			G	G	G	G	T	T	T	T	T	T								S		S	S							T	T	S	S	G	G	G	G	G	S		S	S	T	T							T	T	B									B	S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	P	V	D	E	E	S	E	S	L	F	D	V	V	V	R	Q	L	A	G	H	G	P	E	P	H	Q	I	W	L	P	P	L	D	V	P	P	T	L	D	E	L	L	P	P	L	S	P	S	A	A	H	G	Y	T	A	D	G	W	E	W	R	G	R	L	H	A	V	V	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T		S						S	S				S		S			B	T	T	T	S	S	S						T	T	T					T	T		T	T	S	S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	D	R	P	F	D	Q	R	R	D	P	Y	W	L	D	L	S	G	G	A	G	H	V	G	V	A	G	G	P	Q	T	G	K	S	T	M	L	R	T	L	I	T	S	L	A	L	L	H	T	P	Q	E	V	Q	F	Y	C	L	D	F	G	G	G	T	L	A	G	L	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	T										S	S	S	S								S	T	T	S	S																S		T	T	T									S	S	S	G	G	G	G	G	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	P	H	V	G	S	V	A	T	R	L	D	A	D	R	I	R	R	T	V	A	E	V	S	A	L	L	E	Q	R	E	Q	E	F	T	E	R	G	I	D	S	M	A	T	Y	R	R	L	R	A	T	G	E	Y	A	G	D	G	F	G	D	V	F	L	V	V	D	N	W	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S							T	T																										T	T			S										T	T				T	T	S									S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	L	R	Q	D	Y	E	A	L	E	D	S	I	T	Q	L	A	A	R	G	L	G	Y	G	I	H	V	V	L	S	S	N	K	W	S	E	F	R	T	S	I	R	D	L	L	G	T	K	L	E	L	R	L	G	D	P	Y	E	S	E	V	D	R	K	K	A	A	N	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T													S	G	G	G	T								S		G	G	G	S						T	T										S	S	S	T	T		S	S								S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	E	N	R	P	G	R	G	L	T	R	D	G	Y	H	F	L	T	A	L	P	R	I	D	G	D	T	S	A	E	T	L	T	E	G	I	A	T	T	V	K	T	I	R	E	A	W	H	G	P	T	A	P	P	V	R	M	L	P	N	V	L	P	A	A	Q	L	P	S	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		T	T					T	T	S							B	S		S	S					G	G	G																		S											S	S			G	G	G	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	S	G	T	R	I	P	I	G	I	D	E	D	S	L	S	P	V	Y	L	D	F	N	T	D	P	H	F	L	V	F	G	D	T	E	C	G	K	S	N	L	L	R	L	I	T	A	G	I	I	E	R	Y	T	P	Q	Q	A	R	L	I	F	I	D	Y	S	R	S	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T								T	T	T								T	T	T										T	T	S	S																		T	T	T								T	T				G
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	D	V	A	T	T	E	H	Q	I	G	Y	A	A	S	S	T	A	A	S	S	L	V	R	D	I	K	G	A	M	E	A	R	L	P	P	P	D	L	T	P	E	Q	L	R	S	R	S	W	W	T	G	A	E	L	F	L	V	V	D	D	Y	E	M	V	A	T	S	D	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S		S	T	T						S	S																		T	S			T	T									T		S			S										G	G	G	T		S	T	T		T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	L	R	P	L	A	E	L	L	P	Q	A	R	D	I	G	L	H	L	I	I	A	R	S	M	G	G	A	G	R	A	L	Y	E	P	I	I	Q	R	I	K	E	M	A	S	P	G	L	V	M	S	G	N	K	D	E	G	I	L	L	G	N	V	K	P	H	K	L	P	Q	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	G	G	G	G	G	T	G	G	G	G	T	T	T	T									S	T	T	T	G	G	G	G	G	S									T	T							B			G	G	G				S	T	T				B				T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.
Sequence	R	G	Y	F	V	E	R	R	S	G	T	R	L	I	Q	T	A	Y	R	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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