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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ndkA_

Fold library idPDB HeaderMoleculeTitle
c4ndkA_PDB header: fluorescent protein, de novo proteinChain: A: PDB Molecule: e23p-yfp, chimeric construct;PDBTitle: crystal structure of a computational designed engrailed homeodomain2 variant fused with yfp


Added to library: Sat Nov 8 08:21:41 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QKKALDLAFYFDRRLTPEWRRYLSQRLGLNEEQIERWFRRKEQQIMVSKGEELFTGVVPILVELDGDVNG
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Known secondary structure (DSSP)

T




S

TSS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence HKFSVSGEGEGDATYGKLTLKLICTTGKLPVPFPTLVTTLLQCFARYPDHMKQHDFFKSAMPEGYVQERT
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Known secondary structure (DSSP) GGGTTTSS
SS
GGGGTTT

GGG
B

GGGGGG
TTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence IFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYITADKQKNGIKANFKI
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Known secondary structure (DSSP) TTS
TTS

TTSTTTTT
B
S



GGGT
 .........220.........230.........240.........250.........260.........270.
Sequence RHNIEDGGVQLADHYQQNTPIGDGPVLLPDNHYLSYQSKLSKDPNEKRDHMVLLEFVTAAG
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Known secondary structure (DSSP) BTTS
SSSS





S

TT

SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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