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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4nclB_

Fold library idPDB HeaderMoleculeTitle
c4nclB_PDB header: translationChain: B: PDB Molecule: eukaryotic translation initiation factor 5b-like protein;PDBTitle: crystal structure of eukaryotic translation initiation factor eif5b2 (517-970) from chaetomium thermophilum in complex with gdp


Added to library: Sat Jul 12 08:39:10 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NLRSPICCILGHVDTGKTKLLDKIRQTGGITQQIGATYFPVEAIKQKTAVVNKDGKFEFKVPGLLIIDTP
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Known secondary structure (DSSP)





TTSS




TTTGGG
SS






S
 .........80.........90.........100.........110.........120.........130.........140
Sequence GHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIESLRLLRERKTPFVVALNKIDRLYGWKKIENNGFRE
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Known secondary structure (DSSP) SSGGG
S
GGGGGGT
STTT


TT


GGGSTT



TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence SFALQNKAVQNEFRNRLDQVKLQFAEQGFNSELFYENKNFARYVSLVPTSAHTGEGIPDMLKLIVQLCQE
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Known secondary structure (DSSP) TS
TT
TTT
S
TTT

TTT
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence RMASSLMYLSELQATVLEVKAIEGFGVTIDVILSNGILREGDRIVLCGLEGPIKTNIRALLTPAPGQYIH
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Known secondary structure (DSSP) SS


S
TTTSTT

BTTS






 .........290.........300.........310.........320.........330.........340.........350
Sequence HKEVKAAQGVKISAPGLEGAIAGSRLLVVGPDDDEEELEEEVESDLQSLFSRVEKTGKGVSVQASTLGSL
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Known secondary structure (DSSP) SSS
TT
TTB
TT
B

SSS
T
S
TT

SSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence EALLDFLKDCKIPVANVGIGPVYKRDVMQCGIMLEKAPDYAVMLCFDVKVDKEAQQYADENGIKIFTADI
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Known secondary structure (DSSP) TT

SSB

GGG
S

B
TT
SS
 .........430.....
Sequence IYHLFDQFTKHMQEQ
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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