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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4n9nA_

Fold library idPDB HeaderMoleculeTitle
c4n9nA_PDB header: transcriptionChain: A: PDB Molecule: sterol uptake control protein 2, lysozyme;PDBTitle: crystal structure of saccharomyces cerevisiae upc2 transcription2 factor fused with t4 lysozyme


Added to library: Sat Dec 6 08:20:41 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NLNLIDXKLFHHYCTKVWPTITAAKVSGPEIWRDYIPELAFDYPFLXHALLAFSATHLSRTETGLEQYVS
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Known secondary structure (DSSP)


TTTTSS
T
TTS
SSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SHRLDALRLLREAVLEISENNTDALVASALILIXDSLANASVDNIFEXLRIDEGLRLKIYKDTEGYYTIG
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Known secondary structure (DSSP) GGGGGGS
TSSTT


TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAA
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Known secondary structure (DSSP) TTSSS
TTS

TTB

T
TTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LINXVFQXGETGVAGFTNSLRXLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYVDSXSPS
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Known secondary structure (DSSP) T
TT
TT
TTS
SSSTTS


 .........290.........300.........310.........320.........330.........340.........350
Sequence AWIFHVKGAATILTAVWPLSERSKFHNIISVDLSDLGDVINPDVGTITELVCFDESIADLYPVGLDSPYL
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Known secondary structure (DSSP) TTT



TTSTT
S
S


TTTSS
SSSS






SSSSGGGTT

SSSTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence ITLAYLDKLHREKNQGDFILRVFTFPALLDKTFLALLXTGDLGAXRIXRSYYKLLRGFATEVKDKVWFLE
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Known secondary structure (DSSP)

STTGGGTS
T

SS

TTSS
 ........
Sequence GVTQVLPQ
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Known secondary structure (DSSP) TTT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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