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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4n91A_

Fold library idPDB HeaderMoleculeTitle
c4n91A_PDB header: transport proteinChain: A: PDB Molecule: trap dicarboxylate transporter, dctp subunit;PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 anaerococcus prevotii dsm 20548 (apre_1383), target efi-510023, with3 bound alpha/beta d-glucuronate


Added to library: Sat Nov 16 08:52:33 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KTIIRVGHNQSQNHPTHLGLLAFEEYVEDKLGDKYDIQVYPSELLGSQIDXVQLTQTGAINICVASNAIL
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Known secondary structure (DSSP)

SS
TTSTTT
TTTT
STSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ETFNDVWEIFNLPYLFASSEAYHHVXDDPEIVKPIFESTREGGFEGVTWLDAGSRSFYTKDKPVNSPEDL
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Known secondary structure (DSSP) TTT
GGGGGGG
TT

SST
TTTGGGT



SSS

SSGGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence SGLKIRVQQSPTNVRXXDLLGSSASPXGFGEVYTALQSGIIDGAENNEXSLTDNGHGEVCKYYSYDXHQX
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Known secondary structure (DSSP) TT

S
TT


GGGTS
S
TTT
GGGT


 .........220.........230.........240.........250.........260.........270.........280
Sequence VPDIVIANYSWLEGLPEEDRKVFDEGFKVLNEVQRKEWKVAVDKAKEKASEXGVEFIYPDQKPFVDAVAP
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Known secondary structure (DSSP)

S
TT



S
 .........290.........300........
Sequence LTKEVLERNDKLAPFYDAIQKYNEEYPA
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Known secondary structure (DSSP)
TTSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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