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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4n8gC_

Fold library idPDB HeaderMoleculeTitle
c4n8gC_PDB header: transport proteinChain: C: PDB Molecule: trap dicarboxylate transporter, dctp subunit;PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 chromohalobacter salexigens dsm 3043 (csal_0660), target efi-501075,3 with bound d-alanine-d-alanine


Added to library: Sat Nov 2 08:34:05 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ATTLNLSYNGPPDTDKNAVHLFASNLKRLVEEKTDGDIQLKLYPNSXLGEEQERXEQVINTPSLNIASFA
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Known secondary structure (DSSP)

SS
S
TTT
TTTS
TTTT

SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence GLSPIVPEIYVSAIPFLFEDYEAAHQFFDEGDYWNKVEDTLEERTGAELLGVIEEGGFLDFTNSKRPISS
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Known secondary structure (DSSP) TTT
GGGGGGG
TT

SS
S

SSS
SSS


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence PEDFEGLRFRAXDPSQVALYEAFGASGTPIPWTDTYXALKTNVADGQXNPPXYIIXGSLYEVQKYLTLAN
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Known secondary structure (DSSP) GGGGTT
SSTT


GGGTTS
S
TTGGGS




 .........220.........230.........240.........250.........260.........270.........280
Sequence VQYSDQFLIANGEWYDDLSEENRQAIEAAVQEASELNREDVEKRVDERIQFLADQGXEVIEPTEDELAAF
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Known secondary structure (DSSP)
S


TTS
TT



 .........290.........300.........310......
Sequence REKGQPAYIEWLTDEQGIDRAWIEXALEDAGQSDLL
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Known secondary structure (DSSP) TS


T
GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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