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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4n7qA_

Fold library idPDB HeaderMoleculeTitle
c4n7qA_PDB header: lyaseChain: A: PDB Molecule: phosphomethylpyrimidine synthase, chloroplastic;PDBTitle: crystal structure of eukaryotic thic from a. thaliana


Added to library: Sat Nov 16 08:54:49 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IPSFEECFPKSTKEHKEVVHEESGHVLKVPFRRVHLSGGEPAFDNYDTSGPQNVNAHIGLAKLRKEWIDR
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Known secondary structure (DSSP)


STT
TTT



STT







SSS

TTT



TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence REKLGTPRYTQMYYAKQGIITEEMLYCATREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRKFLVK
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Known secondary structure (DSSP)

S


TT


TS
TS



TT
TT




TTS

 .........150.........160.........170.........180.........190.........200.........210
Sequence VNANIGNSAVASSIEEEVYKVQWATMWGADTIMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDG
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Known secondary structure (DSSP)


SS


TT




STTT
SS

TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence IAENLNWEVFRETLIEQAEQGVDYFTIHAGVLLRYIPLTAKRLTGIVSRGGSIHAKWCLAYHKENFAYEH
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Known secondary structure (DSSP)
GGG

T


TT

GGGGGGGTT
SS



T


T
 .........290.........300.........310.........320.........330.........340.........350
Sequence WDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKDVQVMNEGPGHVPMHKIPE
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Known secondary structure (DSSP) T


TT

SSGGGTT
TT


SB

GGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence NMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLCYVTPKEHLGLPNRDDVKAGVI
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Known secondary structure (DSSP) TTT



BS
SS
TT
TT




TTTTTS


 .........430.........440.........450.........460.........470..
Sequence AYKIAAHAADLAKQHPHAQAWDDALSKARFEFRWMDQFALSLDPMTAMSFHD
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Known secondary structure (DSSP) TT
TTTTT
SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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