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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4n6kA_

Fold library idPDB HeaderMoleculeTitle
c4n6kA_PDB header: transport proteinChain: A: PDB Molecule: trap dicarboxylate transporter-dctp subunit;PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 desulfovibrio salexigens dsm2638, target efi-510113 (desal_0342),3 complex with diglycerolphosphate


Added to library: Sat Nov 16 08:53:06 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YKLTLKLSHVFSPAEQLSKSMDAVAESIYEKTDGAINIQTFPQAQLPAYKEGVEQVVRGAKFISVEDPSF
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Known secondary structure (DSSP)





TTSTTTS
TTSSS
TT
S
GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence IGDYVPDFKALYAPMLYRSFDEYVNLTQSDLVKKMQAEAEKQGIKILALDYIYGFRNLITQKVIKTPADL
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Known secondary structure (DSSP) GTTTSTT
TT

SSTSTTSS


SGGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence KGMKIRTPGSKSYIDTLTAMGAVATPLPWGETLSAVQQGVVDGLEGSEFTNIGTKVYEGPTKNVANTRHI
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Known secondary structure (DSSP) TT

SSTS

GGGTTSSSB
TTGGGSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence LGTCGVYISTKVWNDIPAKYQKIIQDEFTNGANHMVNLLKSQHGGVVKELESYGVKFNEVDGDAFRAALK
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Known secondary structure (DSSP) TTS
TT



G
 .........290.........300.........310.
Sequence PLYKEQKGMTPGIYQSIFKELDAMRAENLYF
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Known secondary structure (DSSP) GG



TTS
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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