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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4n4qD_

Fold library idPDB HeaderMoleculeTitle
c4n4qD_PDB header: lyaseChain: D: PDB Molecule: acylneuraminate lyase;PDBTitle: crystal structure of n-acetylneuraminate lyase from mycoplasma2 synoviae, crystal form ii


Added to library: Sat May 24 08:57:22 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NFDKFKGLFPAMVTPFTKDGKLHKAGVKEVVNFLVEKQKVDGIYITGSTGEFLLLSFEDKKEVMKLVAEA
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Known secondary structure (DSSP)

GGG
B



B
TT

B
TS

SSSTTTTGGG

 .........80.........90.........100.........110.........120.........130.........140
Sequence NAGRVTLIAQIGSLNIEETKELAKLAKELKYDAISAITPYYYNFSFNETHHYYEEISKAADIPMLIYYLP
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Known secondary structure (DSSP) TTSS


S
TT
S



SS


TT

S


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence QLAGKVSTDQFGKLLEIKNVIGSKYGATDLFAFERLMSKYPDKLFMFAWDEALAMGLTMGAKGFIGSTYN
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Known secondary structure (DSSP)
S




TSTT

S

TTS

GGGTT

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VNAKGANAIIKAWEANDKEAVMKLTHTYNDYVLDLISKGLMQSLKAIMRLHGVDAGYTRKPFWRYEDEEI
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Known secondary structure (DSSP) TT
TTS
TT



B

TTS



 .........290...
Sequence KKHAEFITDKYLK
Predicted secondary structure



SS confidence












Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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