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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4n48A_

Fold library idPDB HeaderMoleculeTitle
c4n48A_PDB header: transferase/rnaChain: A: PDB Molecule: cap-specific mrna (nucleoside-2'-o-)-methyltransferase 1;PDBTitle: cap-specific mrna (nucleoside-2'-o-)-methyltransferase 1 protein in2 complex with capped rna fragment


Added to library: Sat Jan 25 08:14:36 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VDWRDEPEPSACEQVSWFPECTTEIPDTQEMSDWMVVGKRKMIIEDETEFCGEELLHSVLQCKSVFDVLD
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Known secondary structure (DSSP)

GGGS



S




B




S



TTGGGGT





TT

SSS
GGGGS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GEEMRRARTRANPYEMIRGVFFLNRAAMKMANMDFVFDRMFTNPRDSYGKPLVKDRELLYFADVCAGPGG
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Known secondary structure (DSSP)
TTGGGTTTTSSSTTTTTTTS
B
TTS
BS





S
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FSEYVLWRKKWHAKGFGMTLKGPNDFKLEDFSELFEPYYGEGGIDGDGDITRPENISAFRNFVLDNTDRK
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Known secondary structure (DSSP) TTS

SSTTS

GGG

TT

STTGGGS


TTSTTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSIVRTGGHFICKTFDLFTPFSVGLVYLLYCCFER
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Known secondary structure (DSSP)






TTTGGGT



S
 .........290.........300.........310.........320.........330.........340.........350
Sequence VCLFKPITSRPANSERYVVCKGLKVGIDDVRDYLFAVNIKLNQLRNTDSDVNLVVPLEVIKGDHEFTDYM
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Known secondary structure (DSSP)

TTS
TTS


S

TTSSSS
TT
 .........360.........370.........380.........390.........400.
Sequence IRSNESHCSLQIKALAKIHAFVQDTTLSEPRQAEIRKECLRLWGIPDQARV
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Known secondary structure (DSSP)
TT


TTT







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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