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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4n3gA_

Fold library idPDB HeaderMoleculeTitle
c4n3gA_PDB header: translationChain: A: PDB Molecule: eukaryotic translation initiation factor 5b-like protein,PDBTitle: crystal structure of eukaryotic translation initiation factor eif5b2 (870-1116) from chaetomium thermophilum, domains iii and iv


Added to library: Sat Jul 12 10:49:04 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GKGVSVQASTLGSLEALLDFLKDCKIPVANVGIGPVYKRDVMQCGIMLEKAPDYAVMLCFDVKVDKEAQQ
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Known secondary structure (DSSP)


SSTT



BSSB

STT
S

B
 .........80.........90.........100.........110.........120.........130.........140
Sequence YADENGIKIFTADIIYHLFDQFTKHMQEQLEKKKEESKMLAVFPCVLNPVAVFNKTNPIVVGVDVVDGQL
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Known secondary structure (DSSP) TT
SSTTTT




SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence KLNTPIAAVKMNPTTGQKEIISLGRVTGIERDHKPLQVCKKGQPAVAIKIEMGGHQPAYGRHLDEKDVLY
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Known secondary structure (DSSP) TT

TTT

TT
STT



SS



BTTTB
TTS
 .........220.........230.........240.......
Sequence SHISRASIDVLKQFYRDVVTTDEWQLIIKLKSVFDVQ
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Known secondary structure (DSSP)



TTT

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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