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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4n0tA_

Fold library idPDB HeaderMoleculeTitle
c4n0tA_PDB header: rna binding protein/rnaChain: A: PDB Molecule: u4/u6 snrna-associated-splicing factor prp24;PDBTitle: structure of an entwined u6 rna/prp24 complex and implications for2 snrnp assembly


Added to library: Sat May 17 08:40:16 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RNRELTTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKKNFRFARIEFARYDGALAAITKTHKVVG
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Known secondary structure (DSSP)

TGGG
TT

GGGS

TTSSSSSTTTT
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence QNEIIVSHLTECTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCV
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Known secondary structure (DSSP) T


S



TT

TT





SS
TT

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence EKLNGLKIEGYTLVTKVSNPLEKSKRTDSATLEGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAG
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Known secondary structure (DSSP) TT
TT


GGG



TTTT

GGG

GGGS


TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence QKEHSFNNCCAFMVFENKDSAERALQMNRSLLGNREISVSLADKKPFLERNEVKRLLASRNSKELETLIC
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Known secondary structure (DSSP) TTTTT
SSSSGGGTT
TT



T


TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence LFPLSDKVSPSLICQFLQEEIHINEKDIRKILLVSDFNGAIIIFRDSKFAAKMLMILNGSQFQGKVIRSG
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Known secondary structure (DSSP) S

TT

TS


GGGGGGTSSTT
TT
 .........360...
Sequence TINDMKRYYNNQQ
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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