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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4n0rB_

Fold library idPDB HeaderMoleculeTitle
c4n0rB_PDB header: structural genomics, unknown functionChain: B: PDB Molecule: putative glycoside hydrolase;PDBTitle: crystal structure of a putative glycoside hydrolase (bvu_0362) from2 bacteroides vulgatus atcc 8482 at 1.80 a resolution


Added to library: Sat Oct 26 08:27:31 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QDKVECWDRFELSFKQVTKGNPFDIRLSATFVCGKEKKTVEGFYDGENTYRIRFXPAVAGEWRYVTSSSI
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Known secondary structure (DSSP)

TTS



SS
GGG

TT

STT


S
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GAXNGRKGTFTVIPAGKDNHGXVLVDGEHNFKYADGTRYYPXGTTAYAWTHXKETTQEATLKSFGEAGFN
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Known secondary structure (DSSP) GGGSS



TT



TTTTTS





TTGGGS
S


 .........150.........160.........170.........180.........190.........200.........210
Sequence KVRXCVFPKNYSLVKDEPALYPFEIEKTIKDKEGNERKEWDFDRFDPAFFQHLEKRIDQLNRLGIEADLI
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Known secondary structure (DSSP) SS


BTTB



S

S
TTS

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LFHPYDKGRWGFDAXSNEVNVRYIKYITARLASFRNVWWSXANEWDYVKAKTVDDWKLLTKTVVENDPYR
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Known secondary structure (DSSP)
SS
TTSS
TTS

TT
TTSSGGG
TT

T
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence HLCSIHGATATYFDYWXPEFTHVSIQDEAPVLSSTASATLRKIYRKPVICDEVGYEGNLPYRWGRLSPQQ
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Known secondary structure (DSSP)




STT



TTSTT
SS
SGGGSS
S
S



SSTTS
B
 .........360.........370.........380.........390.........400.........410.........420
Sequence XTCFILNGLLGGIYVTHGECYQQGNEPIFWAQGGSLKGESWKRVKFLRTIIEAAPHPLEXADISRDLVTS
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Known secondary structure (DSSP) TT






TTS






SSSSS

SSTTT
SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence TAGPDYYLVNXGKDVKGFWTFNLPVKNADYNKLQKNKRFKVEIIDVWAXTVTEYPVIFETTEELDYRVFD
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Known secondary structure (DSSP) TT

SS

S
S

TTS



TT
TTTT
S

B


BTTB
 .........500.........510.
Sequence IHHRGVRIPDAPYIVLRITEV
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Known secondary structure (DSSP) TT



SSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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