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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4n0lB_

Fold library idPDB HeaderMoleculeTitle
c4n0lB_PDB header: rna binding proteinChain: B: PDB Molecule: predicted component of a thermophile-specific dna repairPDBTitle: methanopyrus kandleri csm3 crystal structure


Added to library: Sat Nov 16 08:52:10 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GIGGTITLVGEIRLRTGTRIGTSEEEIEIGGLDNPVIRDPVSGYPYVPGSSLKGRARALFELAWMKSREI
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Known secondary structure (DSSP)



SS
SS

TTTTTTT

B



TTT
SB
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence EPDVFFGAHHNERHECGFVRREVYEEAKEYLREDPPWLENGTCPVCRIFGSAGDGIGFSDPGRLEDERRG
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Known secondary structure (DSSP)
GGGTTS



S

SGGG
SS

TT
BTTB

B
SSTT
TT

TTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LGYDPYGRYRDPNDAQELSGVVDVKKEARVAFRDAHPTTYTVNDVFERAGEPTEVKHMERVPKGSRFGLE
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Known secondary structure (DSSP)
SS
TTTTT

GGGTTTS


B

S

B
B
TT
S







TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VVYRVEDGEELESDLKYLMSSLKLVEDQGIGHSTSRGYGRVEFRIAALCARSTGWYLDPGAGEGFPEEED
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Known secondary structure (DSSP)


GGG
S
SSSS

TGGGTS

S
S
 .........290.........300.........310.........320.........330....
Sequence KDEAADEVTYLSDLEAERYEIVIRARDLEDRAYLRPEEWVERLDEVVGELPWGR
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Known secondary structure (DSSP) TTTT
GGGGG


SSSSS
B
TTSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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