Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4n0iB_

Fold library idPDB HeaderMoleculeTitle
c4n0iB_PDB header: ligaseChain: B: PDB Molecule: glutamyl-trna(gln) amidotransferase subunit b,PDBTitle: crystal structure of s. cerevisiae mitochondrial gatfab in complex2 with glutamine


Added to library: Sat Apr 19 22:52:40 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YALKCGLEIHTQLNTKNKLFSQSTNSATSLVDAPNHHTSYYDIALPGTQPVLNLEAILFAMKLSLALGSQ
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)




SB
SSS
SB

S
TTTS
TT
S

TTTTT
TT





T
 .........80.........90.........100.........110.........120.........130.........140
Sequence VNSISQFDRKHYFYGDQPQGYQLTQHYRPFARGGKINLSKELDDIDESAKEIGILQLQIEQDTGKSHYTV
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP)
S




TT
TTS
SSS
S



SSS




 .........150.........160.........170.........180.........190.........200.........210
Sequence ITLVDLNRSNVPLIELVTKPDFSDIKQVRAFIKKYQNLVRHLHISSGDLETGAMRVDVNLSINEYARVEL
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)
TTSTT

S
B
STTS



TTTTSTT


 .........220.........230.........240.........250.........260.........270.........280
Sequence KNLPNTSSIINAIKYEYQRQVELTSSLMEPETRGWTGSSTVKLIDYRYMPDPELPYINLAPDVISGVRGL
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)



S


TTSS



SS


B






SSS



T
 .....
Sequence MPQLP
Predicted secondary structure




SS confidence




Known secondary structure (DSSP)





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D