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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4n0bA_

Fold library idPDB HeaderMoleculeTitle
c4n0bA_PDB header: transcription activatorChain: A: PDB Molecule: hth-type transcriptional regulatory protein gabr;PDBTitle: crystal structure of bacillus subtilis gabr, an autorepressor and2 transcriptional activator of gabt


Added to library: Sat Nov 2 09:21:43 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ITITLDRSEQADYIYQQIYQKLKKEILSRNLLPHSKVPSKRELAENLKVSVNSVNSAYQQLLAEGYLYAI
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TTS

TTSS
TT


T

TS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ERKGFFVEELDMFSAEEHPPFALPDDLKEIHIDQSDWISFSHMSSDTDHFPIKSWFRCEQKAASRSYRTL
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SS
TTTTT





TT


SS


SSS

TTSTTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence GDMSHPQGIYEVRAAITRLISLTRGVKCRPEQMIIGAGTQVLMQLLTELLPKEAVYAMEEPGYRRMYQLL
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Known secondary structure (DSSP) SSS

TT

T




GGG

SSS
TT

S

 .........220.........230.........240.........250.........260.........270.........280
Sequence KNAGKQVKTIMLDEKGMSIAEITRQQPDVLVTTPSHQFPSGTIMPVSRRIQLLNWAAEEPRRYIIEDDYD
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Known secondary structure (DSSP) TT

TT


S

SS
TTT




SSS

SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence SEFTYDVDSIPALQSLDRFQNVIYMGTFSSLLPGLRISYMVLPPELLRAYKQRGYDLQTCSSLTQLTLQE
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Known secondary structure (DSSP) TT
BSSS




GGGG
SSS





TTT



TT





S
 .........360.........370.........380.........390.........400.........410.........420
Sequence FIESGEYQKHIKKMKQHYKEKRERLITALEAEFSGEVTVKGANAGLHFVTEFDTRRTEQDILSHAAGLQL
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Known secondary structure (DSSP) TSTTSSTTTGGGS
SBTT

SS
TT
 .........430.........440.........450.........460........
Sequence EIFGMSRFNLKETGRPALIIGFARLKEEDIQEGVQRLFKAVYGHKKIP
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Known secondary structure (DSSP)
SGGG








SS

STTTT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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