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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4mx6A_

Fold library idPDB HeaderMoleculeTitle
c4mx6A_PDB header: transport proteinChain: A: PDB Molecule: trap-type c4-dicarboxylate:h+ symport system substrate-PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 shewanella oneidensis (so_3134), target efi-510275, with bound3 succinate


Added to library: Sat Oct 19 08:31:42 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence APVEIKFSHVVAENTPKGQMALKFKELVEQRLPGEYTVSVFPNSQLFGDNNELAALLLNDVQFVAPSLSK
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Known secondary structure (DSSP)


SS
SSSSTTT
TTSS

TTTTTS
SBB

BGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence FERYTKRLQVFDLPFLFNDMDAVNRFQQGEAGQALLNSMSRKGIVGLGYLHNGMKQFTANTPLKQPSDAK
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Known secondary structure (DSSP)
TTT
SGGGGGGSTT

SSSTTTTGGGT
SS

SSGGGGT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GLKFRVMASDVLAAQFDAVGAIPVKKPFSEVFTLLQTRAIDGQENTWSNTYSQKFYEVQSHITESNHGVL
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Known secondary structure (DSSP) T

S
TTT


GGGTTSSSB
TTGGGS
S



S
 .........220.........230.........240.........250.........260.........270.........280
Sequence DYMVVTSDAFWKSLPADKRKVIKEALDESIALGNKIAAEKDNEDKQLILDSKLSQLVTLSPAERQQWVDV
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Known secondary structure (DSSP) S
TSS


 .........290.........300.....
Sequence MKPVWSKFEDQVGKDVIEAAVAANK
Predicted secondary structure


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Known secondary structure (DSSP)
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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