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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4mt0A_

Fold library idPDB HeaderMoleculeTitle
c4mt0A_PDB header: membrane protein, tranport proteinChain: A: PDB Molecule: mtre protein;PDBTitle: crystal structure of the open state of the neisseria gonorrhoeae mtre2 outer membrane channel


Added to library: Sat Aug 9 09:07:55 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence CTMIPQYEQPKVEVAETFQNDTSVSSIRAVDLGWHDYFADPRLQKLIDIALERNTSLRTAVLNSEIYRKQ
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SB
TT




SS
TTTS
GGGTB


 .........80.........90.........100.........110.........120.........130.........140
Sequence YMIERNNLLPTLAANANGSRQGSLSGGNVSSSYNVGLGAASYELDLFGRVRSSSEAALQGYFASVANRDA
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Known secondary structure (DSSP) GGGGS




SSS




SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREETYNAVRIAVQGRRDFRRRPAPAEALIESAKADYAH
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Known secondary structure (DSSP) TS



SGGGGT
 .........220.........230.........240.........250.........260.........270.........280
Sequence AARSREQARNALATLINRPIPEDLPAGLPLDKQFFVEKLPAGLSSEVLLDRPDIRAAEHALKQANANIGA
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Known secondary structure (DSSP) TTS


S






GGGSB
S





B
 .........290.........300.........310.........320.........330.........340.........350
Sequence ARAAFFPSIRLTGSVGTGSVELGGLFKSGTGVWAFAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESA
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Known secondary structure (DSSP) TTTTS
SSGGGTTSTT


S

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence VQSAFQDVANALAAREQLDKAYDALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSSYSAEGAALSA
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Known secondary structure (DSSP) TTSS
S
 .........430.........440.....
Sequence QLTRAENLADLYKALGGGLKRDTQT
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Known secondary structure (DSSP) TT

SSSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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