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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4mruA_

Fold library idPDB HeaderMoleculeTitle
c4mruA_PDB header: sugar binding proteinChain: A: PDB Molecule: susd homolog;PDBTitle: crystal structure of a susd homolog (bt1281) from bacteroides2 thetaiotaomicron vpi-5482 at 1.90 a resolution


Added to library: Sat Oct 5 08:30:31 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NYDLGSTIRGLQGLVIPAQEHLYQFXEAXCGGSYAGYFGETRTGWLEKYSTYNPKTDWLKAPFTDVISET
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Known secondary structure (DSSP)


TBTTB
STTTTTS

TT

S
TTTT


GGGGSTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YPKYYAVLQHEDAPVALALAKLLRVTIXQRVTDIYGPIPYSKVLNAAYDSQKDVYXRXFQELEEADQALE
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Known secondary structure (DSSP)


SSBS
TT





B
 .........150.........160.........170.........180.........190.........200.........210
Sequence DNXTEGNSGFEKLDDVYYGKLQQWRLFLHSLQLRXAXRLCYTDXAAEAQSIAEKAVTAGVIEKNDDNALF
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Known secondary structure (DSSP)

SS

S
TTS
TTTTT
TTTSTT



SGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence HVAENRSALCFNDWKDYRVGADIICYXNGYADPRRDKYFTKVKNNDQEGYYGXRIGINSPFSDDDXITSY
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Known secondary structure (DSSP)

SS
TTS

BTT
TTB

SSS



B
SS


SS
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence SNRLXTASDPYVWXTASEVAFLRAEGALRKWNXGGEAKDFYETGVKLSFEEHGASGAEDYLNSIASPSGY
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Known secondary structure (DSSP)

B


TT


TT


SS
T


TT






B
 .........360.........370.........380.........390.........400.........410.........420
Sequence TDPLGSYSTGSPANITVKWNEXGEQAFEENLERIITQKWIALFPNGIESWSEHRRTGYPKLLPVVVNKGR
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Known secondary structure (DSSP)

TTSSS
B

S



SS

TTGGGGTT


S




SS


S
 .........430.........440.........450.........460.........470......
Sequence NVSTEAGXRRLXYPNEEYTQNSFHLNNAINVLIKESSNNQGGDTGGTHVWWDRKAN
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Known secondary structure (DSSP) S

TTT


S



S
SS
SSSSSTTS

TT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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