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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4mo9A_

Fold library idPDB HeaderMoleculeTitle
c4mo9A_PDB header: solute-binding proteinChain: A: PDB Molecule: periplasmic binding protein;PDBTitle: crystal structure of troa-like periplasmic binding protein fepb from2 veillonella parvula


Added to library: Sat Sep 28 08:31:23 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PIEITDVTGRTVTLKKPAERVVLQWSGAGGPFFTISALXGKDTPKVIAGXDTSLQDYRADXWKHFTAEXP
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Known secondary structure (DSSP)

TTS
SS


S

STTTTSSGGGGGGGB
S

G
 .........80.........90.........100.........110.........120.........130.........140
Sequence ELAKIPVVGTIGDKTFNAEQVVALNPDVIFIPVDLKDQYESDAKAKXDAAGIQTIYIDYHAEKLESHQKS
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Known secondary structure (DSSP) GGGGS
B


TTSTT

TT

STTT

STT

 .........150.........160.........170.........180.........190.........200.........210
Sequence IEAIGKALGKEERAAEISKFYTNRVTRVLDRVSKINKPKPTVYLEVGXNGPEEFGNSFSGNYSWGALATX
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Known secondary structure (DSSP) T


S


GGG
TTS





TTST
 .........220.........230.........240.........250.........260.........270.........280
Sequence AGADVITKDAIKKSSPINPEFVLEKNPDIIXIXGSYWPKKPTSXRLGFEATEDSSQALLKAFTTERQGWS
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Known secondary structure (DSSP) TT
TTTTT
SSS





SBB

TT
TTS
B
BSS

STTGG
 .........290.........300.........310.........320.........330.........340.........
Sequence DLKAVENKQVYSAHHGLPREVFDAAVFEYLAKTFYPEEFKDVDPEATLKEFYDKFLPFSYSGIWFXHXN
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Known secondary structure (DSSP) G
TT
BTTSSSSTTT
GGGGTT


SS


SB



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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