PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4mnuA_

Fold library id	PDB Header	Molecule	Title
c4mnuA_	PDB header: transcription regulator	Chain: A: PDB Molecule: slya-like transcription regulator;	PDBTitle: crystal structure of uncharacterized slya-like transcription regulator2 from listeria monocytogenes

Links to external resources
Added to library: Sat Sep 28 08:50:46 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A X K D I L R D I G V I A R A L D S I S N I E F K E L N L A K G Q F I Y L V R I C E N Q G I I Q E K L V D I L K I D R T T A S R A I K N L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T G G G T
T T T S T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K N G L I I K K Q N K N N K K N K L L F P T E K G Q Q L Y P L I I R E N E Y S N A V A L K G F T E A E I N X L T D A L K K V K E N I A D D W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T
T T S
T T T

. . . . . . . . . 150 .

Sequence L Y V K K G N K R S Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	X	K	D	I	L	R	D	I	G	V	I	A	R	A	L	D	S	I	S	N	I	E	F	K	E	L	N	L	A	K	G	Q	F	I	Y	L	V	R	I	C	E	N	Q	G	I	I	Q	E	K	L	V	D	I	L	K	I	D	R	T	T	A	S	R	A	I	K	N	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T	G	G	G	T		T	T	T											S	T	T											T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	N	G	L	I	I	K	K	Q	N	K	N	N	K	K	N	K	L	L	F	P	T	E	K	G	Q	Q	L	Y	P	L	I	I	R	E	N	E	Y	S	N	A	V	A	L	K	G	F	T	E	A	E	I	N	X	L	T	D	A	L	K	K	V	K	E	N	I	A	D	D	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S							T	T		T	T	S																												T	T	T
	.	.	.	.	.	.	.	.	.	150	.
Sequence	L	Y	V	K	K	G	N	K	R	S	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T