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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4mnpA_

Fold library idPDB HeaderMoleculeTitle
c4mnpA_PDB header: sugar binding proteinChain: A: PDB Molecule: n-acetylneuraminate-binding protein;PDBTitle: structure of the sialic acid binding protein from fusobacterium2 nucleatum subsp. nucleatum atcc 25586


Added to library: Sat Jul 12 08:23:28 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KYNLKMGMTAGTSQNEYKAAEVFAKELKKRSNGEIELKLYPNAQLGKDDLAMMQQLEGGALDFTFAETGR
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Known secondary structure (DSSP)

SS
TTSTTTS
TT
SSSSTTS


GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence FSTFFPEAEVFTLPYMIKDFNHMKKAVNTKFGKDLFKKVHDKKGMTVLAQAYNGTRQTTSNKAIKSLADM
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Known secondary structure (DSSP) GGGTSGGGGGGGSTTT

STTS
SS

SSGGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence KGMKLRVPGAAANLAYAKYTEAAPTPMAFSEVYLALQTNAVDGQENPLSTIKAQKFYEVQKYLAMTNHIL
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Known secondary structure (DSSP) TT

S
TTT


GGGTTSSSB
TTGGGG
S




 .........220.........230.........240.........250.........260.........270.........280
Sequence NDQLYLVSNITMEELPENLQKVVKESAEVAAEYHTKLFMDEEKSLKDFFKSKGVTITEPNLVDFKKAMKP
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Known secondary structure (DSSP) S
TTTTT



ST
 .........290.........300.....
Sequence FYDEYIKKNGKVGENAIKAIEAVRL
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Known secondary structure (DSSP) TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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