PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4mnhC_

Fold library id	PDB Header	Molecule	Title
c4mnhC_	PDB header: immune system	Chain: C: PDB Molecule: t-cell receptor gamma chain v region pt-gamma-1/2, human	PDBTitle: structure of the dp10.7 tcr

Links to external resources
Added to library: Sat Jan 11 09:21:43 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G R T K S V I R Q T G S S A E I T C D L A S T G Y I H W Y L H Q E G K A P Q R L L Y Y D S Y T S S V V L E S G I S P G K Y D T Y G S N L R M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S
T T S
S S S
T T
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I L R N L I E N D S G V Y Y C A T W D E K Y Y K K L F G S G T T L V V T E D L K N V F P P E V A V F E P S E A E I S H T Q K A T L V C L A T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G
T T S S S
S
G G G
B
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G F Y P D H V E L S W W V N G K E V H S G V C T D P Q P L K E Q P A L N D S R Y A L S S R L R V S A T F W Q N P R N H F R C Q V Q F Y G L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B S S
T T
T T
S S
S
T T
S S
T
T T
B

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . .

Sequence E N D E W T Q D R A K P V T Q I V S A E A W G R A D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
S S S
B S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	R	T	K	S	V	I	R	Q	T	G	S	S	A	E	I	T	C	D	L	A	S	T	G	Y	I	H	W	Y	L	H	Q	E	G	K	A	P	Q	R	L	L	Y	Y	D	S	Y	T	S	S	V	V	L	E	S	G	I	S	P	G	K	Y	D	T	Y	G	S	N	L	R	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S												S									T	T	S										S	S	S							T	T			T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	L	R	N	L	I	E	N	D	S	G	V	Y	Y	C	A	T	W	D	E	K	Y	Y	K	K	L	F	G	S	G	T	T	L	V	V	T	E	D	L	K	N	V	F	P	P	E	V	A	V	F	E	P	S	E	A	E	I	S	H	T	Q	K	A	T	L	V	C	L	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S			G	G	G											T	T	S	S	S													S		G	G	G		B																	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	F	Y	P	D	H	V	E	L	S	W	W	V	N	G	K	E	V	H	S	G	V	C	T	D	P	Q	P	L	K	E	Q	P	A	L	N	D	S	R	Y	A	L	S	S	R	L	R	V	S	A	T	F	W	Q	N	P	R	N	H	F	R	C	Q	V	Q	F	Y	G	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B	S	S									T	T					T	T					S	S				S		T	T		S	S																	T		T	T												B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Sequence	E	N	D	E	W	T	Q	D	R	A	K	P	V	T	Q	I	V	S	A	E	A	W	G	R	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S				S	S	S				B	S