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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4mncA_

Fold library idPDB HeaderMoleculeTitle
c4mncA_PDB header: transport proteinChain: A: PDB Molecule: trap dicarboxylate transporter-dctp subunit;PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 polaromonas sp. js666 (bpro_4736), target efi-510156, with bound3 benzoyl formate, space group p21


Added to library: Sat Sep 28 08:25:42 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QEVTLRLVSAFPENGIYVQRLLPWIAKVNAEGKGVLQINFLGGPKAIPTFEAGNAVKTGVVDMAMNTGAF
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Known secondary structure (DSSP)

SS
TTS
TTTSTTTS
GGGTSSS
GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence YTNVMPEADFLKLTQIPVAEQRKNGAFDAINKVWNEKGNTQYLARMVENQPFHIYTNKKIDKPDLSGQKI
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Known secondary structure (DSSP)
TTT
GGGGGGGG

S
SS
S

SS

SSS

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RISPVYRDFFQALNANVVTTPPGEVYTALERGVVDGYGWPIGGIFDLNWQEKTKFRVDPGFYDAEVSLTM
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Known secondary structure (DSSP)
GGGTT


GGGTT

SSS
TTTTTGGGG

SS
BS


 .........220.........230.........240.........250.........260.........270.........280
Sequence NLPAYKKLTDAQRNYLQKQLLVLEAENTFWTRYGNVETARQETAGIQTIKFDAATSKAFREKAYEVGWAG
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Known secondary structure (DSSP) S
GGGTT



 .........290.........300.....
Sequence AMKQSPEVAARFKTLFSKAENLYFQ
Predicted secondary structure





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Known secondary structure (DSSP)
S
GGGSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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