Fold library entry viewer: c4mmiA_

Added to library: Sat Feb 1 08:17:56 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	T	R	K	D	F	D	H	I	N	L	E	Y	S	G	L	E	K	V	N	K	A	V	A	A	G	N	Y	D	D	A	A	K	A	L	L	A	Y	Y	R	E	K	S	K	A	R	E	P	D	F	S	N	A	E	K	P	A	D	I	R	Q	P	I	D	K	V	T	R	E	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	G	G	G	T	T	B		T	T	S	T	T											T																				S					T	T	S	S	S				T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	D	K	A	L	V	H	Q	F	Q	P	H	K	G	Y	G	Y	F	D	Y	G	K	D	I	N	W	Q	M	W	P	V	K	D	N	E	V	R	W	Q	L	H	R	V	K	W	W	Q	A	M	A	L	V	Y	H	A	T	G	D	E	K	Y	A	R	E	W	V	Y	Q	Y	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T						T	T	S						T	T	T	T		T	T			S	S	S									T	T		T															T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	W	A	R	K	N	P	L	G	L	S	Q	D	N	D	K	F	V	W	R	P	L	E	V	S	D	R	V	Q	S	L	P	P	T	F	S	L	F	V	N	S	P	A	F	T	P	A	F	L	M	E	F	L	N	S	Y	H	Q	Q	A	D	Y	L	S	T	H	Y	A	E	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S		T	T	S									S																				T	T	S	T	T	S																									S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	N	H	R	L	F	E	A	Q	R	N	L	F	A	G	V	S	F	P	E	F	K	D	S	P	R	W	R	Q	T	G	I	S	V	L	N	T	E	I	K	K	Q	V	Y	A	D	G	M	Q	F	E	L	S	P	I	Y	H	V	A	A	I	D	I	F	L	K	A	Y	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																		T	T	B	T	T																				B		T	T	S		B	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	K	R	V	N	L	E	K	E	F	P	Q	S	Y	V	Q	T	V	E	N	M	I	M	A	L	I	S	I	S	L	P	D	Y	N	T	P	M	F	G	D	S	W	I	T	D	K	N	F	R	M	A	Q	F	A	S	W	A	R	V	F	P	A	N	Q	A	I	K	Y	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		G	G	G	S																		T			T	T	S						S	S																				S	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	D	G	K	Q	G	K	A	P	N	F	L	S	K	A	L	S	N	A	G	F	Y	T	F	R	S	G	W	D	K	N	A	T	V	M	V	L	K	A	S	P	P	G	E	F	H	A	Q	P	D	N	G	T	F	E	L	F	I	K	G	R	N	F	T	P	D	A	G	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	S	S	S				S		S	S				T	T	T	T						S		S	S	T	T														T	T			S		T	T							T	T			S	S						S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	Y	S	G	D	E	A	I	M	K	L	R	N	W	Y	R	Q	T	R	I	H	S	T	L	T	L	D	N	Q	N	M	V	I	T	K	A	R	Q	N	K	W	E	T	G	N	N	L	D	V	L	T	Y	T	N	P	S	Y	P	N	L	D	H	Q	R	S	V	L	F	I	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S											T		G	G	G	S	S	S				T	T				S													S	S												T	T											T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	K	Y	F	L	V	I	D	R	A	I	G	E	A	T	G	N	L	G	V	H	W	Q	L	K	E	D	S	N	P	V	F	D	K	T	K	N	R	V	Y	T	T	Y	R	D	G	N	N	L	M	I	Q	S	L	N	A	D	R	T	S	L	N	E	E	E	G	K	V	S	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T											S													T	T							T	T	T	T							T	T	S										S	S													S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	V	Y	N	K	E	L	K	R	P	A	F	V	F	E	K	P	K	K	N	A	G	T	Q	N	F	V	S	I	V	Y	P	Y	D	G	Q	K	A	P	E	I	S	I	R	E	N	K	G	N	D	F	E	K	G	K	L	N	L	T	L	T	I	N	G	K	Q	Q	L	V	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T																S	S	S													S	S	S										T	T		B	G	G	G	T									T	T
	.	.	.	.	.	.
Sequence	P	L	E	H	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		S

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PDB structure

FASTA sequence

Hidden Markov model

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