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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4mlzB_

Fold library idPDB HeaderMoleculeTitle
c4mlzB_PDB header: solute binding proteinChain: B: PDB Molecule: periplasmic binding protein;PDBTitle: crystal structure of periplasmic binding protein from jonesia2 denitrificans


Added to library: Sat Sep 21 08:45:07 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EATTYPLTVDNCGTTATFDSVPERVVTLKSSTTELLLALGRGDRIVATSYLDGPVAPWLEDEAAQVPAVS
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Known secondary structure (DSSP)



SSTTSS


SSTT
GGGS

SS

GGGTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence APLDERLPSLEKVLETEPDLIFAGWESXVTTEGLADRDRLTQLGVNTLVAPSACKEDGYRPDPLTWESLA
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Known secondary structure (DSSP) S
S
SS


TT

SSSGGGGSTTTT

TT

GGG

STTTS
SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence QEITTVGTIFDAHSEAQSLVDTXNEQLAAISPDSRGLSALWFSSGSDTPFVGGGSGSAQLVXDTVGLRNI
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Known secondary structure (DSSP) TT





S


SSS

SSST
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence GSDIDDTWGPXSWEAIIDANPDVIVLVDSSWSSAQKKKDILTSHPVASTLDAVVNDRYLVIDFPPTEPGV
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Known secondary structure (DSSP) TTT
SSS



S
SSS
STTGGGSTT
SGGGSSST
 .........290.........
Sequence RTADGAVALADQLAALTVE
Predicted secondary structure



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Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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