PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4mknA_

Fold library id	PDB Header	Molecule	Title
c4mknA_	PDB header: isomerase	Chain: A: PDB Molecule: triosephosphate isomerase;	PDBTitle: crystal structure of chloroplastic triosephosphate isomerase from2 chlamydomonas reinhardtii at 1.1 a of resolution

Links to external resources
Added to library: Sat Jan 11 09:25:31 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S S A K F F V G G N W K C N G S V A N V A K L V D E L N A G T I P R G V D V V V A P P F I Y I D Y V M Q H L D R D K Y Q L S A Q N A W I G G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
T T
G G G S
T T T
S
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N G A F T G E V S A E Q L T D F G V P W V I L G H S E R R S L F G E S N E V V A K K T S H A L A A G L G V I A C I G E T L E Q R N S G S V F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
T T
T
S
S
T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K V L D A Q M D A L V D E V K D W T K V V L A Y E P V W A I G T G V V A S P E Q A Q E V H A Y L R Q Y C A K K L G A A V A D K L R I I Y G G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
G G G S S S S
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . .

Sequence S V S D T N C K D L S K Q E D I D G F L V G G A S L K G A A F V T I C N A A G P K A K P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T T S T T
G G G G S G G G G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	S	A	K	F	F	V	G	G	N	W	K	C	N	G	S	V	A	N	V	A	K	L	V	D	E	L	N	A	G	T	I	P	R	G	V	D	V	V	V	A	P	P	F	I	Y	I	D	Y	V	M	Q	H	L	D	R	D	K	Y	Q	L	S	A	Q	N	A	W	I	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S									S																					T	T									G	G	G								S		T	T	T						S				S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	G	A	F	T	G	E	V	S	A	E	Q	L	T	D	F	G	V	P	W	V	I	L	G	H	S	E	R	R	S	L	F	G	E	S	N	E	V	V	A	K	K	T	S	H	A	L	A	A	G	L	G	V	I	A	C	I	G	E	T	L	E	Q	R	N	S	G	S	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S		T	T											T							S								S																	T	T																T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	V	L	D	A	Q	M	D	A	L	V	D	E	V	K	D	W	T	K	V	V	L	A	Y	E	P	V	W	A	I	G	T	G	V	V	A	S	P	E	Q	A	Q	E	V	H	A	Y	L	R	Q	Y	C	A	K	K	L	G	A	A	V	A	D	K	L	R	I	I	Y	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S			T	T								G	G	G	S	S	S	S																																					S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Sequence	S	V	S	D	T	N	C	K	D	L	S	K	Q	E	D	I	D	G	F	L	V	G	G	A	S	L	K	G	A	A	F	V	T	I	C	N	A	A	G	P	K	A	K	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			T	T	T						T	S	T	T								G	G	G	G	S									G	G	G	G	G	G