Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4mkmA_

Fold library idPDB HeaderMoleculeTitle
c4mkmA_PDB header: unknown functionChain: A: PDB Molecule: putative surface anchored protein;PDBTitle: repeat domains 1 & 2 of clostridium perfringens cpe0147


Added to library: Sat Dec 7 08:21:33 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EGTLKTTVAADGVNGSSEKEALVSFENSKDGVDVKDTIDYKDLVANEKYNLTGKLXHVKDDGSLEEVATK
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP)

TT

SSS

TT
S

TT

TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence TTEVTAVENGSGQWELDFGNQKLQVGEKYVVFENAESVENLIDTDNNYELDTKQVVKHEDKNDKAQTLIV
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)

GGG



TT

SSSSS




TT
GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence EKPNLPEVKDGTLRTTVIADGVNGSSEKEALVSFENSKDGVDVKDTINYEGLVANQNYTLTGTLXHVKAD
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP)










TT

SSS

TT
S

TT

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GSLEEIATKTTNVTAGENGNGTWGLDFGNQKLQVGEKYVVFENAESVENLIDTDKDYNLDTKQVVKHEDK
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP) S


GGG



TT
SS

B

SSSSS

B



T
 .........290..
Sequence NDKAQTLVVEKP
Predicted secondary structure






SS confidence











Known secondary structure (DSSP) T
GGG



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D