Fold library entry viewer: c4mhcA_

Added to library: Sat Sep 28 08:26:35 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	E	P	L	Q	L	A	S	E	F	V	Q	D	L	S	F	R	D	R	N	T	P	I	L	D	N	P	D	Y	Y	S	K	G	L	D	Y	N	F	S	D	E	V	G	G	L	G	A	F	T	P	F	Q	R	Q	Q	V	T	N	I	P	D	E	V	L	S	Q	V	S	N	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T				S			G	G	G	S	T	T								S	S	T	T	T	T	G	G	G																	T	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	I	K	S	D	M	G	I	F	L	E	L	N	Y	C	W	I	T	S	D	N	K	L	I	L	W	N	I	N	N	S	S	E	Y	H	C	I	D	E	I	E	H	T	I	L	K	V	K	L	V	K	P	S	P	N	T	F	V	S	S	V	E	N	L	L	I	V	A	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S								T	T	T	T							T	T							T	T	T	S	S										S												T	T	S	T	T	T	T	S	S								S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	D	I	Y	I	L	T	I	S	F	N	D	R	T	H	E	L	N	I	F	N	T	G	L	K	V	N	V	T	G	F	N	V	S	N	I	I	S	Y	E	R	T	G	Q	I	F	F	T	G	A	T	D	G	V	N	V	W	E	L	Q	Y	N	K	I	C	L	T	K	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S											S	S	S															T	T	T									T	T	T	T							T	T	S	T	T														S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	E	E	T	I	S	Q	L	E	V	D	Q	S	R	G	V	L	H	T	L	S	T	K	S	I	V	R	S	Y	L	I	T	S	N	G	L	V	G	P	V	L	I	D	A	A	H	I	R	R	G	M	N	A	L	G	V	K	N	S	P	L	L	S	N	R	A	F	K	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S								T	T	T	T							T	T	S									T	T																					T					G	G	G	S	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	I	V	S	I	S	M	C	E	N	N	D	L	F	L	A	V	I	T	T	T	G	V	R	L	Y	F	K	G	S	I	S	R	R	S	I	G	S	L	K	L	D	S	V	K	F	P	P	T	S	G	P	L	S	T	Q	K	A	S	S	T	Y	I	N	T	T	C	A	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T		S	S								T	T												T	T																		T					T	T			T	T		S	B		T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	I	S	P	G	I	Y	F	T	C	V	R	K	R	A	E	H	K	L	Y	V	S	A	P	D	Y	G	I	L	K	N	Y	G	K	Y	V	E	N	T	A	L	L	D	T	T	D	E	I	K	E	I	V	P	L	T	R	S	F	N	Y	T	S	T	P	Q	G	Y	A	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T																												S										S			S								S	S					S		S	S	S	T	T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	F	A	S	Q	Y	S	A	E	P	L	K	V	A	V	L	T	S	N	A	L	E	I	Y	C	Y	R	T	P	D	E	V	F	E	S	L	I	E	N	P	L	P	F	I	H	S	Y	G	L	S	E	A	C	S	T	A	L	Y	L	A	C	K	F	N	K	S	E	H	I	K	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	S										S	S																	T	T	T																									S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	S	A	L	A	F	F	S	A	G	I	P	G	V	V	E	I	K	P	K	S	V	L	S	P	R	F	Y	G	S	A	L	L	I	T	R	L	F	S	Q	I	W	E	E	R	V	F	V	G	I	S	I	T	R	P	Q	V	E	Y	Y	L	S	S	I	S	V	L	A	D	F	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										B	T	T	T	B																							T	T	T	T	T	T	S	B	S	B			B	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	N	I	H	R	P	S	F	V	S	T	A	S	D	A	E	S	I	A	M	N	A	L	I	L	L	I	N	S	I	K	D	A	L	S	L	I	N	V	F	Y	E	D	I	D	A	F	K	S	L	L	N	T	L	M	Y	D	S	K	T	R	E	Y	F	F	D	L	K	F	H	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	G	G	G	T																																	G	G	G																							T		B
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.
Sequence	L	F	T	P	N	A	K	T	K	Q	L	I	K	E	I	L	I	E	V	V	N	A	N	I	A	S	G	T	S	A	D	Y	I	V	N	V	L	K	E	R	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																			T	T		S		T													T

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PDB structure

FASTA sequence

Hidden Markov model

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