PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4mf4F_

Fold library id	PDB Header	Molecule	Title
c4mf4F_	PDB header: lyase	Chain: F: PDB Molecule: hpch/hpai aldolase/citrate lyase family protein;	PDBTitle: crystal structure of a hpch/hpal aldolase/citrate lyase family protein2 from burkholderia cenocepacia j2315

Links to external resources
Added to library: Sat Sep 7 08:27:09 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T N S L K Q R L R D G D E P L Y G L W L S L G S D S A A E A L A H A G Y D W L C I D M E H A P N D S R D V A S Q L R A I A A A H L P S E P V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
T T S
S S S S S
T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V R V P A R E P W L V K R A L D A G A R T L M F P C I E T P D D A A H A V R L T R F P S P E S P D G L R G V A G M V R A A A F G M R R D Y L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T
S
S
S S S T T
T T S G G G G G G T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q T A N A Q V A V I V Q V E S A R G V D E V E R I A A T P G V D C L F V G P A D L A A S L G H L G D I R H P D V E T A M A R V L A A G K Q A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S G G G
S T S T T
T T
T T
T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . .

Sequence G V A V G I F A G D T A A A R Q Y R E A G Y R L I T V S A D V S W L L R A T R Q A L Q E V R S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	N	S	L	K	Q	R	L	R	D	G	D	E	P	L	Y	G	L	W	L	S	L	G	S	D	S	A	A	E	A	L	A	H	A	G	Y	D	W	L	C	I	D	M	E	H	A	P	N	D	S	R	D	V	A	S	Q	L	R	A	I	A	A	A	H	L	P	S	E	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S									S										T	T	S			S						S	S	S	S																	T		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	R	V	P	A	R	E	P	W	L	V	K	R	A	L	D	A	G	A	R	T	L	M	F	P	C	I	E	T	P	D	D	A	A	H	A	V	R	L	T	R	F	P	S	P	E	S	P	D	G	L	R	G	V	A	G	M	V	R	A	A	A	F	G	M	R	R	D	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S											T	T							S				S																S	S	S	T	T							T	T	S	G	G	G	G	G	G	T		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	T	A	N	A	Q	V	A	V	I	V	Q	V	E	S	A	R	G	V	D	E	V	E	R	I	A	A	T	P	G	V	D	C	L	F	V	G	P	A	D	L	A	A	S	L	G	H	L	G	D	I	R	H	P	D	V	E	T	A	M	A	R	V	L	A	A	G	K	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	G	G	G									S						T							S	T	T															T	T		T	T		T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Sequence	G	V	A	V	G	I	F	A	G	D	T	A	A	A	R	Q	Y	R	E	A	G	Y	R	L	I	T	V	S	A	D	V	S	W	L	L	R	A	T	R	Q	A	L	Q	E	V	R	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T								S	S											T