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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4mcoC_

Fold library idPDB HeaderMoleculeTitle
c4mcoC_PDB header: transport proteinChain: C: PDB Molecule: trap dicarboxylate transporter-dctp subunit;PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 rhodoferax ferrireducens (rfer_1840), target efi-510211, with bound3 malonate


Added to library: Sat Sep 7 08:31:05 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SALKISHQFPGGTIKEGDFRDRLVRNFAAEVEKRSKGAMKFEIYPGSSLMKTNAQFSSMRKGALDMALIP
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Known secondary structure (DSSP)

SS



SSSS
TTTSS

TTSSS
GGGTS
S

 .........80.........90.........100.........110.........120.........130.........140
Sequence LSYAGGEVPELNIGLMPGLVVSYEQAYSWKTKPVGIELTRVLQEKGIVLISWIWQAGGVASRGKPVVEPE
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Known secondary structure (DSSP) GGGGTTT
GGGGGGS
TTS

STTTSTT

SSS


SGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence DAKGMKIRGGSREMDMILKDAGAAVVSLPSNEIYAAMQTGAMDAAMTSSTSFISFRLEEVAKALTTGRTG
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Known secondary structure (DSSP) GGTT

SSTT




GGGTTS
STTGGGT


STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence AYWFMFEPLMMSKAIFDKLPKDQRDMLMTVGAEMEKFALEAAKKDDIDVAAVYQKAGAKVVDLSDGTIKK
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Known secondary structure (DSSP)
S


S
TT



 .........290.........300.........310........
Sequence WQDIARKTAWKDYGAKNEGCAKLLALAQQTLAENLYFQ
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Known secondary structure (DSSP) T
TT
TTSTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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