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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4mboA_

Fold library idPDB HeaderMoleculeTitle
c4mboA_PDB header: protein bindingChain: A: PDB Molecule: serine-rich repeat adhesion glycoprotein (srr1);PDBTitle: 1.65 angstrom crystal structure of serine-rich repeat adhesion2 glycoprotein (srr1) from streptococcus agalactiae


Added to library: Sat Nov 9 08:35:58 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MLGKDVSSELQKVNIALKDNTLSEPGTVKLDSSENLVLNFAFSIASVNEGDVFTVKLSDNLDTQGIGTIL
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Known secondary structure (DSSP)

S
B
GGG

TTSSSTTTTTT

S


TT

TTS
TTB


 .........80.........90.........100.........110.........120.........130.........140
Sequence KVQDIMDETGQLLATGSYSPLTHNITYTWTRYASTLNNIKARVNMPVWPDQRIISKTTSDKQCFTATLNN
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Known secondary structure (DSSP) B



TTS

TTT

T
SS
TTTS
S

SS
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QVASIEERVQYNSPSVTEHTNVKTNVRSRIMKLDDERQTETYITQINPEGKEMYFASGLGNLYTIIGSDG
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Known secondary structure (DSSP)




SSTTTTSTT



TTS




 .........220.........230.........240.........250.........260.........270.........280
Sequence SPVNLLNAEVKILKTNSKNLTDSMDQNYDSPEFEDVTSQYSYTNDGSKITIDWKTNSISSTTSYVVLVKI
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Known secondary structure (DSSP)




TT

GGG

SS

S
TTSTT

GGGS

SS

SSS
TT
 .........290.........300.......
Sequence PQSGVLYSTVSDINQTYGSKYSYGHTN
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Known secondary structure (DSSP)



TTS
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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