Fold library entry viewer: c4madA_

Added to library: Sat Aug 30 08:20:34 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	S	Q	L	T	Y	D	D	S	F	L	L	D	G	K	E	I	R	L	L	S	G	A	M	H	Y	F	R	T	V	P	E	Y	W	E	D	R	L	L	K	L	K	A	C	G	F	N	T	V	E	T	Y	V	A	W	N	L	H	E	P	E	E	G	Q	F	V	F	E	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S				T	T												G	G	G	S		G	G	G												T		S													S	B	T	T	B				S	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	D	I	V	R	F	I	K	T	A	E	K	V	G	L	H	V	I	V	R	P	G	P	F	I	C	A	E	W	E	F	G	G	F	P	Y	W	L	L	T	V	P	N	I	K	L	R	C	F	N	Q	P	Y	L	E	K	V	D	A	Y	F	D	V	L	F	E	R	L	R	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G													T									S				T	T	B	G	G	G	G			G	G	G	G	G	S	T	T			S	S	S	S																				G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	L	S	S	N	G	G	P	I	I	A	L	Q	I	E	N	E	Y	G	S	F	G	N	D	Q	K	Y	L	Q	Y	L	R	D	G	I	K	K	R	V	G	N	E	L	L	F	T	S	D	G	P	E	P	S	M	L	S	G	G	M	I	E	G	I	F	E	T	V	N	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	B	G	G	G	T	S	S							S	S	S	G	G	G	T																		S		S									S	S										T	T								S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	R	A	E	S	A	F	A	Q	L	K	Q	Y	Q	P	N	A	P	L	M	C	M	E	F	W	H	G	W	F	D	H	W	G	E	E	H	H	T	R	S	A	E	S	V	V	E	T	L	E	E	I	L	K	Q	N	G	S	V	N	F	Y	M	A	H	G	G	T	N	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S														S	S	S									S	S				B	T	T	S																			T	T	T												B			T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	Y	N	G	A	N	H	N	E	T	D	Y	Q	P	T	I	T	S	Y	D	Y	D	G	L	L	T	E	S	G	D	V	T	E	K	F	Y	A	V	R	K	V	F	E	K	Y	V	D	L	P	E	L	N	L	P	A	P	I	P	K	R	L	F	G	K	V	K	F	T	E	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		B						S	S					B		S	B			T	T		S	B		T	T			B															S													B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	G	L	L	D	S	L	H	R	I	S	T	P	Q	K	S	E	A	P	L	P	M	E	K	Y	G	Q	A	Y	G	F	I	V	Y	E	T	T	I	K	G	A	Y	G	K	Q	A	L	T	V	Q	D	I	H	D	R	G	Q	V	Y	V	N	G	E	Y	V	G	I	V	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G												S	S				G	G	G	G	T			S	S										S														S							T	T								S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	N	R	G	C	S	R	L	V	V	E	L	T	E	E	E	S	K	L	Q	I	I	V	E	N	M	G	R	I	N	Y	G	P	F	V	V	D	Y	K	G	I	T	E	G	V	R	L	G	N	Q	F	L	F	D	W	T	V	Y	P	L	P	L	K	D	L	S	S	L	E	F	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	T	T								S	S														B		S	S	T	T														T	T														S			T	T				B
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	D	E	V	K	E	N	F	P	Y	F	H	K	G	I	L	T	V	D	K	A	A	D	T	F	I	D	L	S	E	W	T	K	G	V	V	F	V	N	G	H	H	L	G	R	Y	W	E	I	G	P	Q	Q	T	L	Y	V	P	A	P	F	L	Q	E	G	E	N	E	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					T	T	S											S	S			B						T	T	S								T	T								T	T	S	S								G	G	G			S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
Sequence	L	L	E	L	H	K	H	H	Q	S	V	T	F	V	D	T	P	V	L	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S				S						S	S

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PDB structure

FASTA sequence

Hidden Markov model

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