PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4m98A_

Fold library id	PDB Header	Molecule	Title
c4m98A_	PDB header: transferase	Chain: A: PDB Molecule: pilin glycosylation protein;	PDBTitle: acetyltransferase domain of pglb from neisseria gonorrhoeae fa1090

Links to external resources
Added to library: Sat Oct 5 08:47:33 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N R K L A V I G A G G H G K V V A E L A A A L G T Y G E I V F L D D R T Q G S V N G F P V I G T T L L L E N S L S P E Q F D I T V A V G N N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T
S
S S
S T T
T T
T T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R I R R Q I T E N A A A L G F K L P V L I H P D A T V S P S A I I G Q G S V V M A K A V V Q A G S V L K D G V I V N T A A T V D H D C L L D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S
T T
T T
T T
T T
T T
T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . .

Sequence A F V H I S P G A H L S G N T R I G E E S R I G T G A C S R Q Q T T V G S G V T A G A G A V I V C D I P D G M T V A G N P A K P L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
T T
T T
T T
T T
T T
T T
S
B
T T
T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	R	K	L	A	V	I	G	A	G	G	H	G	K	V	V	A	E	L	A	A	A	L	G	T	Y	G	E	I	V	F	L	D	D	R	T	Q	G	S	V	N	G	F	P	V	I	G	T	T	L	L	L	E	N	S	L	S	P	E	Q	F	D	I	T	V	A	V	G	N	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S														T			S							S	S			S			T	T							T						T			T	T	T									S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	I	R	R	Q	I	T	E	N	A	A	A	L	G	F	K	L	P	V	L	I	H	P	D	A	T	V	S	P	S	A	I	I	G	Q	G	S	V	V	M	A	K	A	V	V	Q	A	G	S	V	L	K	D	G	V	I	V	N	T	A	A	T	V	D	H	D	C	L	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T									T	T	S				T	T					T	T					T	T					T	T					T	T					T	T					T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Sequence	A	F	V	H	I	S	P	G	A	H	L	S	G	N	T	R	I	G	E	E	S	R	I	G	T	G	A	C	S	R	Q	Q	T	T	V	G	S	G	V	T	A	G	A	G	A	V	I	V	C	D	I	P	D	G	M	T	V	A	G	N	P	A	K	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T					T	T					T	T					T	T					T	T					T	T					T	T					T	T					S		B		T	T					T	T	T	T