PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4m7wA_

Fold library id	PDB Header	Molecule	Title
c4m7wA_	PDB header: transferase	Chain: A: PDB Molecule: purine nucleoside phosphorylase deod-type;	PDBTitle: crystal structure of purine nucleoside phosphorylase from leptotrichia2 buccalis c-1013-b, nysgrc target 029767.

Links to external resources
Added to library: Sat Aug 31 08:31:52 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X G T P H I G A N R G D V A E T I L L P G D P L R A K Y I A E T F L E D V V Q Y N N V R G X L G F T G T Y K G K K V S V Q G T G X G V P S I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T S S
S
S S
G G G
T T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G I Y S H E L I T E F G V K N L I R V G T A G S Y Q E D V K V R D V V I A X S A S T D S A I N K L R F N G A D Y A P T A S S D L V F K A Y E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T S
T T
S T T T
B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I A K A K G L N V K A G N V F T S D T F Y G D D P N A W K K W A E F G V L C V E X E T A Q L Y T T A A K L G V N A L T L L T I S D S F I T H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S S
S
T T T T T
S S T
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . .

Sequence E V T S A E E R Q T T F N E X I E V A L E T A L Q L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	G	T	P	H	I	G	A	N	R	G	D	V	A	E	T	I	L	L	P	G	D	P	L	R	A	K	Y	I	A	E	T	F	L	E	D	V	V	Q	Y	N	N	V	R	G	X	L	G	F	T	G	T	Y	K	G	K	K	V	S	V	Q	G	T	G	X	G	V	P	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S					T	T	S	S		S						S	S																					G	G	G									T	T										S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	I	Y	S	H	E	L	I	T	E	F	G	V	K	N	L	I	R	V	G	T	A	G	S	Y	Q	E	D	V	K	V	R	D	V	V	I	A	X	S	A	S	T	D	S	A	I	N	K	L	R	F	N	G	A	D	Y	A	P	T	A	S	S	D	L	V	F	K	A	Y	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																										S	T	T	S		T	T													S						T	T	T						B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	A	K	A	K	G	L	N	V	K	A	G	N	V	F	T	S	D	T	F	Y	G	D	D	P	N	A	W	K	K	W	A	E	F	G	V	L	C	V	E	X	E	T	A	Q	L	Y	T	T	A	A	K	L	G	V	N	A	L	T	L	L	T	I	S	D	S	F	I	T	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T												S		S	S		S		T	T	T							T	T						S	S												T													S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Sequence	E	V	T	S	A	E	E	R	Q	T	T	F	N	E	X	I	E	V	A	L	E	T	A	L	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									T