PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4m7oA_

Fold library id	PDB Header	Molecule	Title
c4m7oA_	PDB header: iron binding protein	Chain: A: PDB Molecule: iron-binding protein;	PDBTitle: the crystal structure of a possible an iron-binding (periplasmic2 solute-binding) protein from staphylococcus epidermidis atcc 12228.

Links to external resources
Added to library: Sat Aug 31 08:40:16 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K K Y H R I I S L I P S N T E I L Y R L G I G E D I V G V S T V D D Y P K D V K K G K K Q F D A X N L N K E E L I K A K P D L I L A H E S Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S T T
G G G T T
S T T T T T T S
T T S
T
S G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K N S A G K V L K S L K D K G V K V V Y V K D A Q S I D E T Y D T F K S I G Q L T D R E K Q A K E L V D E T K H N V D K I I N S V P K H H K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T T
S T T
T S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K Q E V F X E V S S K P D I Y T A G K D T F F N D X L E K L D A K N S F D D V K G W K S V S K E S I I K R N P D I L I S T E G K S K S D Y I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
B S S T T
T T T T S B S
S
B

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . .

Sequence E X I K K R G G F D K I N A V K N T R I E T V D G D E V S R P G P R I D E G L K D L R D D I Y K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T G G G S T T
B T
S T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	K	Y	H	R	I	I	S	L	I	P	S	N	T	E	I	L	Y	R	L	G	I	G	E	D	I	V	G	V	S	T	V	D	D	Y	P	K	D	V	K	K	G	K	K	Q	F	D	A	X	N	L	N	K	E	E	L	I	K	A	K	P	D	L	I	L	A	H	E	S	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S					S										T	T		G	G	G						T	T				S	T	T	T	T	T	T	S					T	T	S									T			S						G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	N	S	A	G	K	V	L	K	S	L	K	D	K	G	V	K	V	V	Y	V	K	D	A	Q	S	I	D	E	T	Y	D	T	F	K	S	I	G	Q	L	T	D	R	E	K	Q	A	K	E	L	V	D	E	T	K	H	N	V	D	K	I	I	N	S	V	P	K	H	H	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T										T	T											S															T	T																						T	S		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	Q	E	V	F	X	E	V	S	S	K	P	D	I	Y	T	A	G	K	D	T	F	F	N	D	X	L	E	K	L	D	A	K	N	S	F	D	D	V	K	G	W	K	S	V	S	K	E	S	I	I	K	R	N	P	D	I	L	I	S	T	E	G	K	S	K	S	D	Y	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S	S						B	S	S									T	T				T	T	T	T	S	B	S															S						B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Sequence	E	X	I	K	K	R	G	G	F	D	K	I	N	A	V	K	N	T	R	I	E	T	V	D	G	D	E	V	S	R	P	G	P	R	I	D	E	G	L	K	D	L	R	D	D	I	Y	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	T	T	G	G	G	S					T	T						B					T			S	T	T