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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4m64D_

Fold library idPDB HeaderMoleculeTitle
c4m64D_PDB header: transport proteinChain: D: PDB Molecule: melibiose carrier protein;PDBTitle: 3d crystal structure of na+/melibiose symporter of salmonella2 typhimurium


Added to library: Sat Jan 18 09:01:15 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSISMTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNATR
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Known secondary structure (DSSP)
S

SS
SS
TTSTTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SRWGKFKPWILIGTLTNSLVLFLLFVCVTYILWGMTYTIMDIPFWSLVPTITLDKREREQLVPFPRFFAS
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Known secondary structure (DSSP)
SS

TT

TTTTTTTTTSSTT
SSSSS
SSSSST
 .........150.........160.........170.........180.........190.........200.........210
Sequence LAGFVTAGITLPFVSYVGGADRGFGFQMFTLVLIAFFIASTIVTLRNVHEVYSSDNLSCLLGMALAYNIA
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Known secondary structure (DSSP) TTTTTT

S

TTTTTTSSSTT

 .........220.........230.........240.........250.........260.........270.........280
Sequence SNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLLTLIVFPRLVKMLSRRILWAGASVMPVLSCAGLFAM
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Known secondary structure (DSSP)
SSSSTTTSSS




TTTS
TTTTTS



 .........290.........300.........310.........320.........330.........340.........350
Sequence ALADIHNAALIVAAGIFLNIGTALFWVLQVIMVADTVDYGEFKLNIRCESIAYSVQTMVVKGGSAFAAFF
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Known secondary structure (DSSP)
S

SSSSSSTTTTT

TTTTTTTTT




SSGGGGTTT
 .........360.........370.........380..
Sequence IALVLGLIGYTPQFIMIVLPVLFFMMTLVLYF
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Known secondary structure (DSSP) S





GGGTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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