PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4m3qB_

Fold library id	PDB Header	Molecule	Title
c4m3qB_	PDB header: transferase/transferase inhibitor	Chain: B: PDB Molecule: tyrosine-protein kinase mer;	PDBTitle: crystal structure of the catalytic domain of the proto-oncogene2 tyrosine-protein kinase mer in complex with inhibitor unc1917

Links to external resources
Added to library: Sat Nov 30 09:29:19 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L E D V V I D R N L L I L G K I L G S V M E G N L K S L K V A V K T M F L S E A A C M K D F S H P N V I R L L G V C I K P M V I L P F M K Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S B
G G G
T
T T B
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G D L H T Y L L Y S R L E T G P K H I P L Q T L L K F M V D I A L G M E Y L S N R N F L H R D L A A R N C M L R D D M T V C V A D F G P V K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T S S S S S
T T
S
G G G
T T S
G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence W I A I E S L A D R V Y T S K S D V W A F G V T M W E I A T R G M T P Y P G V Q N H E M Y D Y L L H G H R L K Q P E D C L D E L Y E I M Y S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G S
S S
T T S
S S T T
G G G T T
T T
G

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . .

Sequence C W R T D P L D R P T F S V L R L Q L E K L L E S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G
S S G G G S
T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	E	D	V	V	I	D	R	N	L	L	I	L	G	K	I	L	G	S	V	M	E	G	N	L	K	S	L	K	V	A	V	K	T	M	F	L	S	E	A	A	C	M	K	D	F	S	H	P	N	V	I	R	L	L	G	V	C	I	K	P	M	V	I	L	P	F	M	K	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	B			G	G	G																																			T				T	T	B																		T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	D	L	H	T	Y	L	L	Y	S	R	L	E	T	G	P	K	H	I	P	L	Q	T	L	L	K	F	M	V	D	I	A	L	G	M	E	Y	L	S	N	R	N	F	L	H	R	D	L	A	A	R	N	C	M	L	R	D	D	M	T	V	C	V	A	D	F	G	P	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B									T	S	S	S	S	S																									T	T				S				G	G	G					T	T	S										G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	W	I	A	I	E	S	L	A	D	R	V	Y	T	S	K	S	D	V	W	A	F	G	V	T	M	W	E	I	A	T	R	G	M	T	P	Y	P	G	V	Q	N	H	E	M	Y	D	Y	L	L	H	G	H	R	L	K	Q	P	E	D	C	L	D	E	L	Y	E	I	M	Y	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	S							S	S																				T	T	S			S	S	T	T			G	G	G							T	T							T	T											G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Sequence	C	W	R	T	D	P	L	D	R	P	T	F	S	V	L	R	L	Q	L	E	K	L	L	E	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G		S	S	G	G	G	S																T