PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4m3nA_

Fold library id	PDB Header	Molecule	Title
c4m3nA_	PDB header: transferase	Chain: A: PDB Molecule: purine nucleoside phosphorylase deod-type;	PDBTitle: crystal structure of purine nucleoside phosphorylase from meiothermus2 ruber dsm 1279, nysgrc target 029804.

Links to external resources
Added to library: Sat Aug 31 08:29:43 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T P H I S A P P G A V A E A I L L P G D P L R A K Y I A E N F L E N P V L Y N Q V R N X F G Y T G T Y K G K R V S V Q G T G X G I P S A S I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T S S
S
S S S
G G G
T T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Y I H E L V Q F Y G C K T L I R V G T A G A I T E R L K L R D L V I A Q A A C T D S S I N N L R F A G Q N Y A P I A T F D L L R R A Y E Q A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S T T S
T T
S S T T T
B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q S R G X P V H V G N V L S T D T F Y H D Q P N P Y Q L W A Q F G V L A V E X E A A G L Y T L A A K F G V Q A L C I L T I S D H L I T G E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S
S S
S S S
T T T T
S S T
T T T
B

. . . . . . . . . 220 . . . . . . . . . 230 .

Sequence T T P Q E R Q E T F D Q X I E V A L E T I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	P	H	I	S	A	P	P	G	A	V	A	E	A	I	L	L	P	G	D	P	L	R	A	K	Y	I	A	E	N	F	L	E	N	P	V	L	Y	N	Q	V	R	N	X	F	G	Y	T	G	T	Y	K	G	K	R	V	S	V	Q	G	T	G	X	G	I	P	S	A	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S					T	T	S	S		S						S	S												S									G	G	G									T	T										S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	I	H	E	L	V	Q	F	Y	G	C	K	T	L	I	R	V	G	T	A	G	A	I	T	E	R	L	K	L	R	D	L	V	I	A	Q	A	A	C	T	D	S	S	I	N	N	L	R	F	A	G	Q	N	Y	A	P	I	A	T	F	D	L	L	R	R	A	Y	E	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T															S	T	T	S		T	T												S	S						T	T	T						B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	S	R	G	X	P	V	H	V	G	N	V	L	S	T	D	T	F	Y	H	D	Q	P	N	P	Y	Q	L	W	A	Q	F	G	V	L	A	V	E	X	E	A	A	G	L	Y	T	L	A	A	K	F	G	V	Q	A	L	C	I	L	T	I	S	D	H	L	I	T	G	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T												S		S	S		S	S	S		T	T						T	T						S	S												T													T	T	T			B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Sequence	T	T	P	Q	E	R	Q	E	T	F	D	Q	X	I	E	V	A	L	E	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)