PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4m16A_

Fold library id	PDB Header	Molecule	Title
c4m16A_	PDB header: cell adhesion	Chain: A: PDB Molecule: bartonella effector protein (bep) substrate of virb t4ss;	PDBTitle: crystal structure of the n-terminal fic domain of bartonella effector2 protein (bep); substrate of virb t4ss (virb-translocated bep effector3 protein) from bartonella sp. ar 15-3

Links to external resources
Added to library: Sat Aug 9 08:24:20 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A H H H H H H M V L N Y F Y P G T K T L K N K L G I M G Y K Q L E K R C K R N A K K V I N S L R N E P L P E T F D S S Y L K Y L H K R L F G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T B
T T S S
B
T T
T T S
S
S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S A F E W A G Y T R D L S F A F D D G T I A Q M S M M K I P G T D I Y F A H G D K I Q E N L K E F D E I L A S K S N L Q G L S R E D F I E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T T
T T S
T T S
B
T T S S
B
T G G G T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T V K L F S F L N Y I H P F R A G N E A V Q H I F F E K L A E A A G H K L D F S V V T E E R I M R A C N D A M A L K G E E A H Q A M K S L F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T
G G G S
S

. . . . . . . . . 220 . . . . .

Sequence E D I S N P E E V I I L R D F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
G G G G S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	H	H	H	H	H	H	M	V	L	N	Y	F	Y	P	G	T	K	T	L	K	N	K	L	G	I	M	G	Y	K	Q	L	E	K	R	C	K	R	N	A	K	K	V	I	N	S	L	R	N	E	P	L	P	E	T	F	D	S	S	Y	L	K	Y	L	H	K	R	L	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	B		T	T	S	S		B			T	T																								T	T	S				S			S													T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	A	F	E	W	A	G	Y	T	R	D	L	S	F	A	F	D	D	G	T	I	A	Q	M	S	M	M	K	I	P	G	T	D	I	Y	F	A	H	G	D	K	I	Q	E	N	L	K	E	F	D	E	I	L	A	S	K	S	N	L	Q	G	L	S	R	E	D	F	I	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		T	T	T	T			T	T	S					T	T	S									B		T	T	S	S		B																					T	G	G	G	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	V	K	L	F	S	F	L	N	Y	I	H	P	F	R	A	G	N	E	A	V	Q	H	I	F	F	E	K	L	A	E	A	A	G	H	K	L	D	F	S	V	V	T	E	E	R	I	M	R	A	C	N	D	A	M	A	L	K	G	E	E	A	H	Q	A	M	K	S	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S	S																		T					G	G	G	S															S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Sequence	E	D	I	S	N	P	E	E	V	I	I	L	R	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		G	G	G	G	S			T	T