Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4m01D_

Fold library idPDB HeaderMoleculeTitle
c4m01D_PDB header: cell adhesionChain: D: PDB Molecule: serine-rich adhesin for platelets;PDBTitle: n terminal fragment(residues 245-575) of binding region of srap


Added to library: Sat Jun 21 08:24:54 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AVTANTITVNKDNLKQYXTTSGNATYDQSTGIVTLTQDAYSQKGAITLGTRIDSNKSFHFSGKVNLGNKY
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP)


S

TTTT
TTTT
SSTT
SSTTS


S
B
 .........80.........90.........100.........110.........120.........130.........140
Sequence EGHGNGGDGIGFAFSPGVLGETGLNGAAVGIGGLSNAFGFKLDTYHNTSKPNSAAKANADPSNVAGGGAF
Predicted secondary structure





















































SS confidence





































































Known secondary structure (DSSP) TTBSSB

SS
TT



SGGGTTTTTSTT

S


S


GGG
B



GGG
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence GAFVTTDSYGVATTYTSSSTADNAAKLNVQPTNNTFQDFDINYNGDTKVXTVKYAGQTWTRNISDWIAKS
Predicted secondary structure











































SS confidence





































































Known secondary structure (DSSP)
TT




S
TTTS

SS

SS



TTT
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GTTNFSLSXTASTGGATNLQQVQFGTFEYTESAVTQVRYVDVTTGKDIIPPKTYSGNVDQVVTIDNQQSA
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP) T
S
SSSB

STTT



TT




 .........290.........300.........310.........320..
Sequence LTAKGYNYTSVDSSYASTYNDTNKTVKXTNAGQSVTYYFTDV
Predicted secondary structure




























SS confidence









































Known secondary structure (DSSP) TTT

TT
TT
BTTTT

SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D