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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4lz9A_

Fold library idPDB HeaderMoleculeTitle
c4lz9A_PDB header: transport proteinChain: A: PDB Molecule: bh2163 protein;PDBTitle: structure of mate multidrug transporter dinf-bh in complex with r6g


Added to library: Sat Oct 26 09:30:34 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QKQQSERLGTEAIPKLLRSLSIPAMIGMFVMALYNVVDTIFISYAVGIEGVAGVTIAFPIMMIMMSMAGA
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Known secondary structure (DSSP)




SS

S


STTSSS
STTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LGIGGASVISRRLGERRGEEANQVFGNILTVILVLSVIGFISAFTLLGPALQLFGATSVTQGYATDYLFP
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Known secondary structure (DSSP) TTTTT
TTTTTTTTSSS


TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ILLGSIFFFFAFAANNIIRSEGNATFAMVTMIVPAVLNILLDVLFIFGLNMGVLGASIATVIAQASVTGL
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Known secondary structure (DSSP) TTTSSS
TTTSBBTTBSSS
TTTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VLRYFLTGKSTLSLHWSDLRMKGSVIKEVCLVGLPAFVQQSSASLMMIAINSMLLRFGSDFYVGVFGLVQ
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Known secondary structure (DSSP) TSS

SS



SSS
S

TTTT
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence RIMMFVMMPMMGIMQAMQPIVGYNYGAKQYSRLRETVMLGFKVATIFSIGIFALLMLFPEALLRVFTADR
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Known secondary structure (DSSP) TTTTTTTTTTS
TTTTT


T
 .........360.........370.........380.........390.........400.........410.........420
Sequence EVIQAGVSAMHILFCVTFLIGAQIVAGGLYQSLGKPKQALILSLSRQIIFLIPLVLILPHIFGLSGVWWA
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Known secondary structure (DSSP) TTTTTSSSTTGGGTTT
TTTSGGGSS
GGGGTTT
 .........430.........440......
Sequence FPIADVLSFILTVVLLYRDRNVFFLK
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Known secondary structure (DSSP) TTTTTTS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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